Task 91239

Name boinc2docker_18847_1553832730.763990_3
Workunit 41429
Created 30 Mar 2019, 14:26:20 UTC
Sent 30 Mar 2019, 14:27:17 UTC
Report deadline 6 Apr 2019, 14:27:17 UTC
Received 30 Mar 2019, 15:36:12 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 14
Run time 3 min 20 sec
CPU time 3 min 30 sec
Validate state Valid
Credit 3.94
Device peak FLOPS 7.55 GFLOPS
Application version boinc2docker v1.07 (vbox64_mt)
windows_x86_64
Peak working set size 106.25 MB
Peak swap size 122.64 MB
Peak disk usage 676.98 MB

Stderr output

<core_client_version>7.14.2</core_client_version>
<![CDATA[
<stderr_txt>
2019-03-30 15:35:38 (1028): vboxwrapper (7.9.26200): starting
2019-03-30 15:35:38 (1028): Feature: Checkpoint interval offset (62 seconds)
2019-03-30 15:35:38 (1028): Detected: VirtualBox COM Interface (Version: 5.2.26)
2019-03-30 15:35:38 (1028): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-03-30 15:35:38 (1028): Create VM. (boinc_2dc2f0147df69dcd, slot#4)
2019-03-30 15:35:38 (1028): Updating drive controller type and model for desired configuration.
2019-03-30 15:35:38 (1028): Setting Memory Size for VM. (6392MB)
2019-03-30 15:35:38 (1028): Setting CPU Count for VM. (3)
2019-03-30 15:35:38 (1028): Setting Chipset Options for VM.
2019-03-30 15:35:38 (1028): Setting Boot Options for VM.
2019-03-30 15:35:38 (1028): Enabling VM Network Access.
2019-03-30 15:35:38 (1028): Setting Network Configuration for NAT.
2019-03-30 15:35:38 (1028): Disabling USB Support for VM.
2019-03-30 15:35:38 (1028): Disabling COM Port Support for VM.
2019-03-30 15:35:38 (1028): Disabling LPT Port Support for VM.
2019-03-30 15:35:38 (1028): Disabling Audio Support for VM.
2019-03-30 15:35:38 (1028): Disabling Clipboard Support for VM.
2019-03-30 15:35:38 (1028): Disabling Drag and Drop Support for VM.
2019-03-30 15:35:38 (1028): Adding storage controller(s) to VM.
2019-03-30 15:35:38 (1028): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2019-03-30 15:35:38 (1028): Adding VirtualBox Guest Additions to VM.
2019-03-30 15:35:38 (1028): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-03-30 15:35:38 (1028): Enabling shared directory for VM.
2019-03-30 15:35:38 (1028): Starting VM. (boinc_2dc2f0147df69dcd, slot#4)
2019-03-30 15:35:52 (1028): Guest Log: BIOS: VirtualBox 5.2.26

2019-03-30 15:35:52 (1028): Guest Log: CPUID EDX: 0x178bfbff

2019-03-30 15:35:52 (1028): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032

2019-03-30 15:35:52 (1028): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80

2019-03-30 15:35:52 (1028): Guest Log: BIOS: Boot from Hard Disk 0 failed

2019-03-30 15:35:52 (1028): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003

2019-03-30 15:35:52 (1028): Guest Log: BIOS: Booting from CD-ROM...

2019-03-30 15:35:52 (1028): Guest Log: BIOS: KBD: unsupported int 16h function 03

2019-03-30 15:35:52 (1028): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 

2019-03-30 15:35:52 (1028): Successfully started VM. (PID = '9928')
2019-03-30 15:35:52 (1028): Reporting VM Process ID to BOINC.
2019-03-30 15:35:57 (1028): VM state change detected. (old = 'poweroff', new = 'running')
2019-03-30 15:36:07 (1028): Preference change detected
2019-03-30 15:36:07 (1028): Setting CPU throttle for VM. (100%)
2019-03-30 15:36:07 (1028): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2019-03-30 15:36:22 (1028): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds

2019-03-30 15:36:22 (1028): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)

2019-03-30 15:36:27 (1028): Guest Log: net.ipv4.ip_forward = 1

2019-03-30 15:36:27 (1028): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory

2019-03-30 15:36:27 (1028): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory

2019-03-30 15:36:27 (1028): Guest Log: sysctl: "cannot stat %s" is an unknown key

2019-03-30 15:36:27 (1028): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory

2019-03-30 15:36:27 (1028): Guest Log: Segmentation fault

2019-03-30 15:36:32 (1028): Guest Log: automount ...

2019-03-30 15:36:32 (1028): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string

2019-03-30 15:36:32 (1028): Guest Log: automount over.

2019-03-30 15:36:32 (1028): Guest Log: Setting hostname to boot2docker Done.

2019-03-30 15:36:37 (1028): Guest Log: Sat Mar 30 15:36:28 UTC 2019 dhcp -------------------------------

2019-03-30 15:36:42 (1028): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:

2019-03-30 15:36:42 (1028): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1370)

2019-03-30 15:36:42 (1028): Guest Log: Sat Mar 30 15:36:35 UTC 2019 dhcp -------------------------------

2019-03-30 15:36:42 (1028): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log

2019-03-30 15:36:42 (1028): Guest Log: 00:00:00.000929 main     Log opened 2019-03-30T15:36:36.736735000Z

2019-03-30 15:36:42 (1028): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log

2019-03-30 15:36:42 (1028): Guest Log: 00:00:00.005547 main     OS Product: Linux

2019-03-30 15:36:42 (1028): Guest Log: 00:00:00.005797 main     OS Release: 4.1.19-boot2docker

2019-03-30 15:36:42 (1028): Guest Log: 00:00:00.005873 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016

2019-03-30 15:36:42 (1028): Guest Log: 0000:00:00.005946 main     Executable: /sbin/VBoxService

2019-03-30 15:36:42 (1028): Guest Log: 00:00:00.005948 main     Process ID: 792

2019-03-30 15:36:42 (1028): Guest Log: 00:00:00.005949 main     Package type: LINUX_64BITS_GENERIC

2019-03-30 15:36:42 (1028): Guest Log: 0:00.000929 main     Log opened 2019-03-30T15:36:36.736735000Z

2019-03-30 15:36:42 (1028): Guest Log: 00:00:00.008855 main     5.0.16 r105871 started. Verbose level = 0

2019-03-30 15:36:42 (1028): Guest Log: 00:00:00.005547 main     OS Product: Linux

2019-03-30 15:36:42 (1028): Guest Log: 00:00:00.005797 main     OS Release: 4.1.19-boot2docker

2019-03-30 15:36:42 (1028): Guest Log: 00:00:00.005873 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016

2019-03-30 15:36:42 (1028): Guest Log: 00:00:00.005946 main     Executable: /sbin/VBoxService

2019-03-30 15:36:42 (1028): Guest Log: 00:00:00.005948 main     Process ID: 792

2019-03-30 15:36:42 (1028): Guest Log: 00:00:00.146729 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory

2019-03-30 15:36:42 (1028): Guest Log: 00:00:00.162934 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed

2019-03-30 15:36:42 (1028): Guest Log: 00:00:00.005949 main     Package type: LINUX_64BITS_GENERIC

2019-03-30 15:36:42 (1028): Guest Log: 00:00:00.008855 main     5.0.16 r105871 started. Verbose level = 0

2019-03-30 15:36:42 (1028): Guest Log: Mounting BOINC shared/...

2019-03-30 15:36:47 (1028): Guest Log: -------------------

2019-03-30 15:36:47 (1028): Guest Log: Sat Mar 30 14:36:43 UTC 2019

2019-03-30 15:36:47 (1028): Guest Log: 00:00:05.207513 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed

2019-03-30 15:36:53 (1028): Guest Log: Sat Mar 30 14:36:48 UTC 2019

2019-03-30 15:36:53 (1028): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 

2019-03-30 15:36:53 (1028): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00

2019-03-30 15:36:53 (1028): Guest Log:     inet 127.0.0.1/8 scope host lo

2019-03-30 15:36:53 (1028): Guest Log:        valid_lft forever preferred_lft forever

2019-03-30 15:36:53 (1028): Guest Log:     inet6 ::1/128 scope host 

2019-03-30 15:36:53 (1028): Guest Log:        valid_lft forever preferred_lft forever

2019-03-30 15:36:53 (1028): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 

2019-03-30 15:36:53 (1028): Guest Log:     link/ether de:86:9c:a3:3f:2f brd ff:ff:ff:ff:ff:ff

2019-03-30 15:36:53 (1028): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000

2019-03-30 15:36:53 (1028): Guest Log:     link/ether 08:00:27:e6:09:bc brd ff:ff:ff:ff:ff:ff

2019-03-30 15:36:53 (1028): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0

2019-03-30 15:36:53 (1028): Guest Log:        valid_lft forever preferred_lft forever

2019-03-30 15:36:53 (1028): Guest Log:     inet6 fe80::a00:27ff:fee6:9bc/64 scope link 

2019-03-30 15:36:53 (1028): Guest Log:        valid_lft forever preferred_lft forever

2019-03-30 15:36:53 (1028): Guest Log: -------------------

2019-03-30 15:36:53 (1028): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence

2019-03-30 15:36:53 (1028): Guest Log: Waiting for Docker daemon to start...

2019-03-30 15:36:53 (1028): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE

2019-03-30 15:36:53 (1028): Guest Log: Running boinc_app...

2019-03-30 15:36:53 (1028): Guest Log: 00:00:10.208430 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed

2019-03-30 15:36:53 (1028): Guest Log: Importing Docker image from BOINC...

2019-03-30 15:38:38 (1028): Guest Log: Prerun diagnostics...

2019-03-30 15:38:38 (1028): Guest Log: REPOSITORY             TAG                 IMAGE ID            CREATED             SIZE

2019-03-30 15:38:38 (1028): Guest Log: carlosred/mpi-lammps   latest              010869c6d9b8        8 months ago        1.473 GB

2019-03-30 15:38:38 (1028): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES

2019-03-30 15:38:38 (1028): Guest Log: 1.4G	/var/lib/docker

2019-03-30 15:38:38 (1028): Guest Log:               total        used        free      shared  buff/cache   available

2019-03-30 15:38:38 (1028): Guest Log: Mem:           6204          62        4450        1634        1691        4452

2019-03-30 15:38:38 (1028): Guest Log: Swap:          1500           0        1500

2019-03-30 15:38:38 (1028): Guest Log: Prerun commands...

2019-03-30 15:38:38 (1028): Guest Log: Running... 

2019-03-30 15:38:38 (1028): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

2019-03-30 15:38:38 (1028): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed

2019-03-30 15:38:38 (1028): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-03-30 15:38:38 (1028): Guest Log:  13  762k   13   99k    0     0   125k      0  0:00:06 --:--:--  0:00:06  125k

2019-03-30 15:38:38 (1028): Guest Log: 100  762k  100  762k    0     0   605k      0  0:00:01  0:00:01 --:--:--  605k

2019-03-30 15:38:38 (1028): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

2019-03-30 15:38:38 (1028): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed

2019-03-30 15:38:38 (1028): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-03-30 15:38:38 (1028): Guest Log: 100  1272  100  1272    0     0   3319      0 --:--:-- --:--:-- --:--:--  3338

2019-03-30 15:38:43 (1028): Guest Log: Postrun commands...

2019-03-30 15:38:43 (1028): Guest Log: boinc_app exited (0)

2019-03-30 15:38:43 (1028): Guest Log: Saving results...

2019-03-30 15:38:43 (1028): Guest Log: lammps_test.txt

2019-03-30 15:38:43 (1028): VM Completion File Detected.
2019-03-30 15:38:43 (1028): Powering off VM.
2019-03-30 15:38:45 (1028): Successfully stopped VM.
2019-03-30 15:38:50 (1028): Deregistering VM. (boinc_2dc2f0147df69dcd, slot#4)
2019-03-30 15:38:50 (1028): Removing virtual disk drive(s) from VM.
2019-03-30 15:38:50 (1028): Removing network bandwidth throttle group from VM.
2019-03-30 15:38:50 (1028): Removing storage controller(s) from VM.
2019-03-30 15:38:51 (1028): Removing VM from VirtualBox.
15:38:56 (1028): called boinc_finish(0)

</stderr_txt>
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