Task 90394

Name boinc2docker_30766_1553832918.703573_0
Workunit 41599
Created 29 Mar 2019, 4:15:23 UTC
Sent 29 Mar 2019, 5:09:00 UTC
Report deadline 5 Apr 2019, 5:09:00 UTC
Received 29 Mar 2019, 20:35:01 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 8
Run time 1 min 54 sec
CPU time 58 sec
Validate state Valid
Credit 5.72
Device peak FLOPS 17.12 GFLOPS
Application version boinc2docker v1.07 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 103.59 MB
Peak swap size 119.96 MB
Peak disk usage 677.06 MB

Stderr output

<core_client_version>7.10.2</core_client_version>
<![CDATA[
<stderr_txt>
2019-03-29 16:32:57 (23120): vboxwrapper (7.9.26200): starting
2019-03-29 16:32:57 (23120): Feature: Checkpoint interval offset (183 seconds)
2019-03-29 16:32:57 (23120): Detected: VirtualBox COM Interface (Version: 5.2.22)
2019-03-29 16:32:57 (23120): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-03-29 16:32:57 (23120): Create VM. (boinc_fa16a9330f860db7, slot#2)
2019-03-29 16:32:57 (23120): Updating drive controller type and model for desired configuration.
2019-03-29 16:32:58 (23120): Setting Memory Size for VM. (6392MB)
2019-03-29 16:32:58 (23120): Setting CPU Count for VM. (2)
2019-03-29 16:32:58 (23120): Setting Chipset Options for VM.
2019-03-29 16:32:58 (23120): Setting Boot Options for VM.
2019-03-29 16:32:58 (23120): Enabling VM Network Access.
2019-03-29 16:32:58 (23120): Setting Network Configuration for NAT.
2019-03-29 16:32:58 (23120): Disabling USB Support for VM.
2019-03-29 16:32:58 (23120): Disabling COM Port Support for VM.
2019-03-29 16:32:58 (23120): Disabling LPT Port Support for VM.
2019-03-29 16:32:58 (23120): Disabling Audio Support for VM.
2019-03-29 16:32:58 (23120): Disabling Clipboard Support for VM.
2019-03-29 16:32:58 (23120): Disabling Drag and Drop Support for VM.
2019-03-29 16:32:58 (23120): Adding storage controller(s) to VM.
2019-03-29 16:32:58 (23120): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2019-03-29 16:32:58 (23120): Adding VirtualBox Guest Additions to VM.
2019-03-29 16:32:58 (23120): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-03-29 16:32:58 (23120): Enabling shared directory for VM.
2019-03-29 16:32:58 (23120): Starting VM. (boinc_fa16a9330f860db7, slot#2)
2019-03-29 16:33:07 (23120): Guest Log: BIOS: VirtualBox 5.2.22

2019-03-29 16:33:07 (23120): Guest Log: CPUID EDX: 0x178bfbff

2019-03-29 16:33:07 (23120): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032

2019-03-29 16:33:07 (23120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80

2019-03-29 16:33:07 (23120): Guest Log: BIOS: Boot from Hard Disk 0 failed

2019-03-29 16:33:07 (23120): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003

2019-03-29 16:33:07 (23120): Guest Log: BIOS: Booting from CD-ROM...

2019-03-29 16:33:07 (23120): Guest Log: BIOS: KBD: unsupported int 16h function 03

2019-03-29 16:33:07 (23120): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 

2019-03-29 16:33:07 (23120): Successfully started VM. (PID = '11432')
2019-03-29 16:33:07 (23120): Reporting VM Process ID to BOINC.
2019-03-29 16:33:12 (23120): VM state change detected. (old = 'poweroff', new = 'running')
2019-03-29 16:33:22 (23120): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds

2019-03-29 16:33:22 (23120): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)

2019-03-29 16:33:22 (23120): Guest Log: net.ipv4.ip_forward = 1

2019-03-29 16:33:22 (23120): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory

2019-03-29 16:33:22 (23120): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory

2019-03-29 16:33:22 (23120): Guest Log: sysctl: "cannot stat %s" is an unknown key

2019-03-29 16:33:22 (23120): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory

2019-03-29 16:33:22 (23120): Guest Log: Segmentation fault

2019-03-29 16:33:22 (23120): Guest Log: automount ...

2019-03-29 16:33:22 (23120): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string

2019-03-29 16:33:22 (23120): Guest Log: automount over.

2019-03-29 16:33:22 (23120): Guest Log: Setting hostname to boot2docker Done.

2019-03-29 16:33:22 (23120): Guest Log: Fri Mar 29 16:33:17 UTC 2019 dhcp -------------------------------

2019-03-29 16:33:22 (23120): Preference change detected
2019-03-29 16:33:22 (23120): Setting CPU throttle for VM. (100%)
2019-03-29 16:33:22 (23120): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2019-03-29 16:33:27 (23120): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1091)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00 (1320)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:00 (1321)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:01 (1322)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00 (1323)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0 (1324)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0/event0 (1325)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00 (1326)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1327)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1328)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00 (1329)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1330)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1331)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1332)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1333)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1334)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input8 (1335)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input8/event6 (1336)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1337)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1338)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1339)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1340)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1341)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1342)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1343)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1344)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00/power_supply/BAT0 (1345)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1346)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1347)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1348)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1349)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1350)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1351)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1352)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1353)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1354)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1355)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1356)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1357)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1358)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1359)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1360)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1361)

2019-03-29 16:33:27 (23120): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1362)

2019-03-29 16:33:27 (23120): Guest Log: Fri Mar 29 16:33:23 UTC 2019 dhcp -------------------------------

2019-03-29 16:33:27 (23120): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log

2019-03-29 16:33:27 (23120): Guest Log: 00:00:00.000072 main     Log opened 2019-03-29T16:33:23.718205000Z

2019-03-29 16:33:27 (23120): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log

2019-03-29 16:33:27 (23120): Guest Log: 00:00:00.000072 main     Log opened 2019-03-29T16:33:23.718205000Z

2019-03-29 16:33:27 (23120): Guest Log: 00:00:00.010736 main     OS Product: Linux

2019-03-29 16:33:27 (23120): Guest Log: 00:00:00.010889 main     OS Release: 4.1.19-boot2docker

2019-03-29 16:33:27 (23120): Guest Log: 00:00:00.010948 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016

2019-03-29 16:33:27 (23120): Guest Log: 00:00:00.011005 main     Executable: /sbin/VBoxService

2019-03-29 16:33:27 (23120): Guest Log: 00:00:00.011006 main     Process ID: 987

2019-03-29 16:33:27 (23120): Guest Log: 00:00:00.011007 main     Package type: LINUX_64BITS_GENERIC

2019-03-29 16:33:27 (23120): Guest Log: 00:00:00.010736 main     OS Product: Linux

2019-03-29 16:33:27 (23120): Guest Log: 00:00:00.010889 main     OS Release: 4.1.1900:00:00.019245 main     5.0.16 r105871 started. Verbose level = 0

2019-03-29 16:33:27 (23120): Guest Log: boot2docker

2019-03-29 16:33:27 (23120): Guest Log: 00:00:00.010948 main     OS Version: 00:00:00.025805 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory

2019-03-29 16:33:27 (23120): Guest Log: #100:00:00.025899 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed

2019-03-29 16:33:27 (23120): Guest Log:  SMP Sun Apr 17 19:40:54 UTC 2016

2019-03-29 16:33:27 (23120): Guest Log: 00:00:00.011005 main     Executable: /sbin/VBoxService

2019-03-29 16:33:27 (23120): Guest Log: 00:00:00.011006 main     Process ID: 987

2019-03-29 16:33:27 (23120): Guest Log: 00:00:00.011007 main     Package type: LINUX_64BITS_GENERIC

2019-03-29 16:33:27 (23120): Guest Log: 00:00:00.019245 main     5.0.16 r105871 started. Verbose level = 0

2019-03-29 16:33:27 (23120): Guest Log: Mounting BOINC shared/...

2019-03-29 16:33:27 (23120): Guest Log: -------------------

2019-03-29 16:33:27 (23120): Guest Log: Fri Mar 29 20:33:25 UTC 2019

2019-03-29 16:33:32 (23120): Guest Log: 00:00:05.029929 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed

2019-03-29 16:33:32 (23120): Guest Log: Fri Mar 29 20:33:30 UTC 2019

2019-03-29 16:33:32 (23120): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 

2019-03-29 16:33:32 (23120): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00

2019-03-29 16:33:32 (23120): Guest Log:     inet 127.0.0.1/8 scope host lo

2019-03-29 16:33:32 (23120): Guest Log:        valid_lft forever preferred_lft forever

2019-03-29 16:33:32 (23120): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 

2019-03-29 16:33:32 (23120): Guest Log:     link/ether 8e:b6:00:fa:cf:d2 brd ff:ff:ff:ff:ff:ff

2019-03-29 16:33:32 (23120): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000

2019-03-29 16:33:32 (23120): Guest Log:     link/ether 08:00:27:e6:18:bb brd ff:ff:ff:ff:ff:ff

2019-03-29 16:33:32 (23120): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0

2019-03-29 16:33:32 (23120): Guest Log:        valid_lft forever preferred_lft forever

2019-03-29 16:33:32 (23120): Guest Log: -------------------

2019-03-29 16:33:32 (23120): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence

2019-03-29 16:33:32 (23120): Guest Log: Waiting for Docker daemon to start...

2019-03-29 16:33:32 (23120): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE

2019-03-29 16:33:32 (23120): Guest Log: Running boinc_app...

2019-03-29 16:33:32 (23120): Guest Log: Importing Docker image from BOINC...

2019-03-29 16:33:37 (23120): Guest Log: 00:00:10.030741 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed

2019-03-29 16:34:32 (23120): Guest Log: Prerun diagnostics...

2019-03-29 16:34:32 (23120): Guest Log: REPOSITORY             TAG                 IMAGE ID            CREATED             SIZE

2019-03-29 16:34:32 (23120): Guest Log: carlosred/mpi-lammps   latest              010869c6d9b8        8 months ago        1.473 GB

2019-03-29 16:34:32 (23120): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES

2019-03-29 16:34:32 (23120): Guest Log: 1.4G	/var/lib/docker

2019-03-29 16:34:32 (23120): Guest Log:               total        used        free      shared  buff/cache   available

2019-03-29 16:34:32 (23120): Guest Log: Mem:           6204          57        4455        1634        1691        4457

2019-03-29 16:34:32 (23120): Guest Log: Swap:          1499           0        1499

2019-03-29 16:34:32 (23120): Guest Log: Prerun commands...

2019-03-29 16:34:32 (23120): Guest Log: Running... 

2019-03-29 16:34:32 (23120): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

2019-03-29 16:34:32 (23120): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed

2019-03-29 16:34:37 (23120): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-03-29 16:34:37 (23120): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-03-29 16:34:37 (23120): Guest Log:  98  762k   98  751k    0     0   616k      0  0:00:01  0:00:01 --:--:--  616k

2019-03-29 16:34:37 (23120): Guest Log: 100  762k  100  762k    0     0   623k      0  0:00:01  0:00:01 --:--:--  623k

2019-03-29 16:34:37 (23120): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

2019-03-29 16:34:37 (23120): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed

2019-03-29 16:34:37 (23120): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-03-29 16:34:37 (23120): Guest Log: 100  1272  100  1272    0     0   6033      0 --:--:-- --:--:-- --:--:--  6057

2019-03-29 16:34:37 (23120): Guest Log: Postrun commands...

2019-03-29 16:34:37 (23120): Guest Log: boinc_app exited (0)

2019-03-29 16:34:37 (23120): Guest Log: Saving results...

2019-03-29 16:34:37 (23120): Guest Log: lammps_test.txt

2019-03-29 16:34:37 (23120): VM Completion File Detected.
2019-03-29 16:34:37 (23120): Powering off VM.
2019-03-29 16:34:39 (23120): Successfully stopped VM.
2019-03-29 16:34:44 (23120): Deregistering VM. (boinc_fa16a9330f860db7, slot#2)
2019-03-29 16:34:44 (23120): Removing virtual disk drive(s) from VM.
2019-03-29 16:34:44 (23120): Removing network bandwidth throttle group from VM.
2019-03-29 16:34:44 (23120): Removing storage controller(s) from VM.
2019-03-29 16:34:44 (23120): Removing VM from VirtualBox.
16:34:49 (23120): called boinc_finish(0)

</stderr_txt>
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