Task 244100

Name boinc2docker_17480_1564890077.621658_1
Workunit 108803
Created 4 Aug 2019, 3:41:18 UTC
Sent 4 Aug 2019, 4:53:16 UTC
Report deadline 11 Aug 2019, 4:53:16 UTC
Received 4 Aug 2019, 5:04:45 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 67
Run time 1 min 33 sec
CPU time 1 min 16 sec
Validate state Valid
Credit 1.71
Device peak FLOPS 12.95 GFLOPS
Application version boinc2docker v1.07 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 116.12 MB
Peak swap size 5,769.65 MB
Peak disk usage 451.21 MB

Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
2019-08-04 07:03:03 (16106): vboxwrapper (7.7.26197): starting
2019-08-04 07:03:05 (16106): Feature: Checkpoint interval offset (326 seconds)
2019-08-04 07:03:05 (16106): Detected: VirtualBox VboxManage Interface (Version: 5.2.18)
2019-08-04 07:03:05 (16106): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-08-04 07:03:05 (16106): Create VM. (boinc_6df8a2896aedc87e, slot#1)
2019-08-04 07:03:05 (16106): Updating drive controller type and model for desired configuration.
2019-08-04 07:03:06 (16106): Setting Memory Size for VM. (5824MB)
2019-08-04 07:03:06 (16106): Setting CPU Count for VM. (4)
2019-08-04 07:03:06 (16106): Setting Chipset Options for VM.
2019-08-04 07:03:06 (16106): Setting Boot Options for VM.
2019-08-04 07:03:06 (16106): Setting Network Configuration for NAT.
2019-08-04 07:03:06 (16106): Enabling VM Network Access.
2019-08-04 07:03:06 (16106): Disabling USB Support for VM.
2019-08-04 07:03:06 (16106): Disabling COM Port Support for VM.
2019-08-04 07:03:07 (16106): Disabling LPT Port Support for VM.
2019-08-04 07:03:07 (16106): Disabling Audio Support for VM.
2019-08-04 07:03:07 (16106): Disabling Clipboard Support for VM.
2019-08-04 07:03:07 (16106): Disabling Drag and Drop Support for VM.
2019-08-04 07:03:07 (16106): Adding storage controller(s) to VM.
2019-08-04 07:03:07 (16106): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2019-08-04 07:03:07 (16106): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-08-04 07:03:08 (16106): Enabling shared directory for VM.
2019-08-04 07:03:08 (16106): Starting VM. (boinc_6df8a2896aedc87e, slot#1)
2019-08-04 07:03:09 (16106): Successfully started VM. (PID = '16421')
2019-08-04 07:03:09 (16106): Reporting VM Process ID to BOINC.
2019-08-04 07:03:09 (16106): Guest Log: BIOS: VirtualBox 5.2.18
2019-08-04 07:03:09 (16106): Guest Log: CPUID EDX: 0x178bfbff
2019-08-04 07:03:09 (16106): VM state change detected. (old = 'poweroff', new = 'running')
2019-08-04 07:03:09 (16106): Preference change detected
2019-08-04 07:03:09 (16106): Setting CPU throttle for VM. (100%)
2019-08-04 07:03:09 (16106): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2019-08-04 07:03:11 (16106): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-08-04 07:03:11 (16106): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2019-08-04 07:03:11 (16106): Guest Log: BIOS: Boot from Hard Disk 0 failed
2019-08-04 07:03:11 (16106): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2019-08-04 07:03:11 (16106): Guest Log: BIOS: Booting from CD-ROM...
2019-08-04 07:03:12 (16106): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-08-04 07:03:12 (16106): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2019-08-04 07:03:21 (16106): Guest Log: net.ipv4.ip_forward = 1
2019-08-04 07:03:21 (16106): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2019-08-04 07:03:21 (16106): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-08-04 07:03:21 (16106): Guest Log: sysctl: "cannot stat %s" is an unknown key
2019-08-04 07:03:21 (16106): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-08-04 07:03:21 (16106): Guest Log: Segmentation fault
2019-08-04 07:03:21 (16106): Guest Log: automount ...
2019-08-04 07:03:21 (16106): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-08-04 07:03:21 (16106): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-08-04 07:03:21 (16106): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2019-08-04 07:03:21 (16106): Guest Log: automount over.
2019-08-04 07:03:21 (16106): Guest Log: Setting hostname to boot2docker Done.
2019-08-04 07:03:21 (16106): Guest Log: Sun Aug  4 07:03:19 UTC 2019 dhcp -------------------------------
2019-08-04 07:03:26 (16106): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1085)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00 (1310)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:00 (1311)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:01 (1312)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:02 (1313)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:03 (1314)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00 (1315)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0 (1316)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0/event0 (1317)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00 (1318)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1319)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1320)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00 (1321)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1322)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1323)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1324)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1325)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1326)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6 (1327)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6/event5 (1328)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1329)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1330)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1331)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1332)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1333)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1334)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1335)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1336)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1337)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1338)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1339)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1340)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1341)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1342)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1343)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1344)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1345)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1346)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1347)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1348)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1349)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1350)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1351)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1352)
2019-08-04 07:03:26 (16106): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1353)
2019-08-04 07:03:27 (16106): Guest Log: Sun Aug  4 07:03:25 UTC 2019 dhcp -------------------------------
2019-08-04 07:03:27 (16106): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-08-04 07:03:27 (16106): Guest Log: 00:00:00.000082 main     Log opened 2019-08-04T07:03:25.490833000Z
2019-08-04 07:03:27 (16106): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-08-04 07:03:27 (16106): Guest Log: 00:00:00.000082 main     Log opened 2019-08-04T07:03:25.490833000Z
2019-08-04 07:03:27 (16106): Guest Log: 00:00:00.003411 main     OS Product: Linux
2019-08-04 07:03:27 (16106): Guest Log: 00:00:00.003411 main     OS Product: Linux
2019-08-04 07:03:27 (16106): Guest Log: 00:00:00.004532 main     OS Release: 4.1.19-boot2docker
2019-08-04 07:03:27 (16106): Guest Log: 00:00:00.004532 main     OS Release: 4.1.19-boot2docker
2019-08-04 07:03:27 (16106): Guest Log: 00:00:00.005898 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-08-04 07:03:27 (16106): Guest Log: 00:00:00.005898 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-08-04 07:03:27 (16106): Guest Log: 00:00:00.007366 main     Executable: /sbin/VBoxService
2019-08-04 07:03:27 (16106): Guest Log: 00:00:00.007368 main     Process ID: 838
2019-08-04 07:03:27 (16106): Guest Log: 00:00:00.007368 main     Package type: LINUX_64BITS_GENERIC
2019-08-04 07:03:27 (16106): Guest Log: 00:00:00.007366 main     Executable: /sbin/VBoxService
2019-08-04 07:03:27 (16106): Guest Log: 00:00:00.007368 main     Process ID: 838
2019-08-04 07:03:27 (16106): Guest Log: 00:00:00.007368 main     Package type: LINUX_64BITS_GENERIC
2019-08-04 07:03:27 (16106): Guest Log: 00:00:00.014690 main     5.0.16 r105871 started. Verbose level = 0
2019-08-04 07:03:27 (16106): Guest Log: 00:00:00.014690 main     5.0.16 r105871 started. Verbose level = 0
2019-08-04 07:03:27 (16106): Guest Log: 00:00:00.017767 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2019-08-04 07:03:27 (16106): Guest Log: 00:00:00.017826 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2019-08-04 07:03:27 (16106): Guest Log: Mounting BOINC shared/...
2019-08-04 07:03:27 (16106): Guest Log: -------------------
2019-08-04 07:03:27 (16106): Guest Log: Sun Aug  4 05:03:27 UTC 2019
2019-08-04 07:03:32 (16106): Guest Log: 00:00:05.019482 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2019-08-04 07:03:32 (16106): Guest Log: Sun Aug  4 05:03:32 UTC 2019
2019-08-04 07:03:33 (16106): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2019-08-04 07:03:33 (16106): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2019-08-04 07:03:33 (16106): Guest Log:     inet 127.0.0.1/8 scope host lo
2019-08-04 07:03:33 (16106): Guest Log:        valid_lft forever preferred_lft forever
2019-08-04 07:03:33 (16106): Guest Log:     inet6 ::1/128 scope host 
2019-08-04 07:03:33 (16106): Guest Log:        valid_lft forever preferred_lft forever
2019-08-04 07:03:33 (16106): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2019-08-04 07:03:33 (16106): Guest Log:     link/ether 46:9e:00:03:96:33 brd ff:ff:ff:ff:ff:ff
2019-08-04 07:03:33 (16106): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2019-08-04 07:03:33 (16106): Guest Log:     link/ether 08:00:27:da:7d:7c brd ff:ff:ff:ff:ff:ff
2019-08-04 07:03:33 (16106): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2019-08-04 07:03:33 (16106): Guest Log:        valid_lft forever preferred_lft forever
2019-08-04 07:03:33 (16106): Guest Log:     inet6 fe80::a00:27ff:feda:7d7c/64 scope link 
2019-08-04 07:03:33 (16106): Guest Log:        valid_lft forever preferred_lft forever
2019-08-04 07:03:33 (16106): Guest Log: -------------------
2019-08-04 07:03:33 (16106): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2019-08-04 07:03:33 (16106): Guest Log: Waiting for Docker daemon to start...
2019-08-04 07:03:34 (16106): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2019-08-04 07:03:34 (16106): Guest Log: Running boinc_app...
2019-08-04 07:03:34 (16106): Guest Log: Importing Docker image from BOINC...
2019-08-04 07:03:37 (16106): Guest Log: 00:00:10.020680 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2019-08-04 07:04:25 (16106): Guest Log: Prerun diagnostics...
2019-08-04 07:04:25 (16106): Guest Log: REPOSITORY           TAG                 IMAGE ID            CREATED             SIZE
2019-08-04 07:04:25 (16106): Guest Log: carlosred/opensees   latest              4f438504c8d2        13 months ago       1.331 GB
2019-08-04 07:04:25 (16106): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2019-08-04 07:04:25 (16106): Guest Log: 1.3G	/var/lib/docker
2019-08-04 07:04:25 (16106): Guest Log:               total        used        free      shared  buff/cache   available
2019-08-04 07:04:25 (16106): Guest Log: Mem:           5644          64        3979        1521        1600        3989
2019-08-04 07:04:25 (16106): Guest Log: Swap:          1358           0        1358
2019-08-04 07:04:25 (16106): Guest Log: Prerun commands...
2019-08-04 07:04:25 (16106): Guest Log: Running... 
2019-08-04 07:04:26 (16106): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
2019-08-04 07:04:26 (16106): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed
2019-08-04 07:04:26 (16106): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
2019-08-04 07:04:26 (16106): Guest Log: 100  3329  100  3329    0     0   4398      0 --:--:-- --:--:-- --:--:-- 20175
2019-08-04 07:04:26 (16106): Guest Log:          OpenSees -- Open System For Earthquake Engineering Simulation
2019-08-04 07:04:26 (16106): Guest Log:                  Pacific Earthquake Engineering Research Center
2019-08-04 07:04:26 (16106): Guest Log:                         Version 2.5.0 (rev 6248) 32-Bit
2019-08-04 07:04:26 (16106): Guest Log:       (c) Copyright 1999-2016 The Regents of the University of California
2019-08-04 07:04:26 (16106): Guest Log:                               All Rights Reserved
2019-08-04 07:04:26 (16106): Guest Log:   (Copyright and Disclaimer @ http://www.berkeley.edu/OpenSees/copyright.html)
2019-08-04 07:04:26 (16106): Guest Log: Estimated yield curvature: 0.000126984126984127
2019-08-04 07:04:28 (16106): Guest Log: Postrun commands...
2019-08-04 07:04:28 (16106): Guest Log: boinc_app exited (0)
2019-08-04 07:04:28 (16106): Guest Log: Saving results...
2019-08-04 07:04:28 (16106): Guest Log: section1.txt
2019-08-04 07:04:28 (16106): VM Completion File Detected.
2019-08-04 07:04:28 (16106): Powering off VM.
2019-08-04 07:04:28 (16106): Successfully stopped VM.
2019-08-04 07:04:28 (16106): Deregistering VM. (boinc_6df8a2896aedc87e, slot#1)
2019-08-04 07:04:28 (16106): Removing network bandwidth throttle group from VM.
2019-08-04 07:04:28 (16106): Removing storage controller(s) from VM.
2019-08-04 07:04:29 (16106): Removing VM from VirtualBox.
2019-08-04 07:04:29 (16106): Removing virtual ISO 9660 disk from VirtualBox.
07:04:34 (16106): called boinc_finish(0)

</stderr_txt>
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