Task 241275

Name boinc2docker_7717_1564889269.869428_0
Workunit 107391
Created 4 Aug 2019, 3:27:53 UTC
Sent 4 Aug 2019, 3:57:00 UTC
Report deadline 11 Aug 2019, 3:57:00 UTC
Received 4 Aug 2019, 10:26:39 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 837
Run time 14 min 20 sec
CPU time 13 min 10 sec
Validate state Valid
Credit 21.56
Device peak FLOPS 15.56 GFLOPS
Application version boinc2docker v1.07 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 89.15 MB
Peak swap size 114.97 MB
Peak disk usage 238.32 MB

Stderr output

<core_client_version>7.14.2</core_client_version>
<![CDATA[
<stderr_txt>
2019-08-04 01:29:41 (20828): vboxwrapper (7.9.26200): starting
2019-08-04 01:29:41 (20828): Feature: Checkpoint interval offset (46 seconds)
2019-08-04 01:29:41 (20828): Detected: VirtualBox COM Interface (Version: 5.2.8)
2019-08-04 01:29:41 (20828): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-08-04 01:29:41 (20828): Create VM. (boinc_272a2fd25664af05, slot#10)
2019-08-04 01:29:41 (20828): Updating drive controller type and model for desired configuration.
2019-08-04 01:29:42 (20828): Setting Memory Size for VM. (3288MB)
2019-08-04 01:29:42 (20828): Setting CPU Count for VM. (4)
2019-08-04 01:29:42 (20828): Setting Chipset Options for VM.
2019-08-04 01:29:42 (20828): Setting Boot Options for VM.
2019-08-04 01:29:42 (20828): Enabling VM Network Access.
2019-08-04 01:29:42 (20828): Setting Network Configuration for NAT.
2019-08-04 01:29:42 (20828): Disabling USB Support for VM.
2019-08-04 01:29:42 (20828): Disabling COM Port Support for VM.
2019-08-04 01:29:42 (20828): Disabling LPT Port Support for VM.
2019-08-04 01:29:42 (20828): Disabling Audio Support for VM.
2019-08-04 01:29:42 (20828): Disabling Clipboard Support for VM.
2019-08-04 01:29:42 (20828): Disabling Drag and Drop Support for VM.
2019-08-04 01:29:42 (20828): Adding storage controller(s) to VM.
2019-08-04 01:29:42 (20828): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2019-08-04 01:29:42 (20828): Adding VirtualBox Guest Additions to VM.
2019-08-04 01:29:42 (20828): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-08-04 01:29:42 (20828): Enabling shared directory for VM.
2019-08-04 01:29:43 (20828): Starting VM. (boinc_272a2fd25664af05, slot#10)
2019-08-04 01:29:57 (20828): Guest Log: BIOS: VirtualBox 5.2.8

2019-08-04 01:29:57 (20828): Guest Log: CPUID EDX: 0x178bfbff

2019-08-04 01:29:57 (20828): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032

2019-08-04 01:29:57 (20828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80

2019-08-04 01:29:57 (20828): Guest Log: BIOS: Boot from Hard Disk 0 failed

2019-08-04 01:29:57 (20828): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003

2019-08-04 01:29:57 (20828): Guest Log: BIOS: Booting from CD-ROM...

2019-08-04 01:29:57 (20828): Guest Log: BIOS: KBD: unsupported int 16h function 03

2019-08-04 01:29:57 (20828): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 

2019-08-04 01:29:57 (20828): Successfully started VM. (PID = '15176')
2019-08-04 01:29:57 (20828): Reporting VM Process ID to BOINC.
2019-08-04 01:30:02 (20828): VM state change detected. (old = 'poweroff', new = 'running')
2019-08-04 01:30:12 (20828): Preference change detected
2019-08-04 01:30:12 (20828): Setting CPU throttle for VM. (100%)
2019-08-04 01:30:12 (20828): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2019-08-04 01:30:22 (20828): Guest Log: net.ipv4.ip_forward = 1

2019-08-04 01:30:22 (20828): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory

2019-08-04 01:30:22 (20828): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory

2019-08-04 01:30:22 (20828): Guest Log: sysctl: "cannot stat %s" is an unknown key

2019-08-04 01:30:22 (20828): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory

2019-08-04 01:30:22 (20828): Guest Log: Segmentation fault

2019-08-04 01:30:22 (20828): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds

2019-08-04 01:30:22 (20828): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)

2019-08-04 01:30:27 (20828): Guest Log: automount ...

2019-08-04 01:30:27 (20828): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string

2019-08-04 01:30:27 (20828): Guest Log: automount over.

2019-08-04 01:30:27 (20828): Guest Log: Setting hostname to boot2docker Done.

2019-08-04 01:30:27 (20828): Guest Log: Sun Aug  4 01:30:20 UTC 2019 dhcp -------------------------------

2019-08-04 01:30:32 (20828): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1114)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00 (1352)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:00 (1353)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:01 (1354)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:02 (1355)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:03 (1356)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00 (1357)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0 (1358)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0/event0 (1359)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00 (1360)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1361)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1362)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00 (1363)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1364)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1365)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1366)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1367)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1368)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6 (1369)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6/event5 (1370)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1371)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1372)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1373)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1374)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1375)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1376)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1377)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1378)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1379)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1380)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1381)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1382)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1383)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1384)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1385)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1386)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1387)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1388)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1389)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1390)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1391)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1392)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1393)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1394)

2019-08-04 01:30:32 (20828): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1395)

2019-08-04 01:30:32 (20828): Guest Log: Sun Aug  4 01:30:26 UTC 2019 dhcp -------------------------------

2019-08-04 01:30:32 (20828): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log

2019-08-04 01:30:32 (20828): Guest Log: 00:00:00.000152 main     Log opened 2019-08-04T01:30:26.983454000Z

2019-08-04 01:30:32 (20828): Guest Log: 00:00:00.000314 main     OS Product: Linux

2019-08-04 01:30:32 (20828): Guest Log: 00:00:00.000380 main     OS Release: 4.1.19-boot2docker

2019-08-04 01:30:32 (20828): Guest Log: VBo00:00:00.000458 main     OS Version: #1 SMP Sun Apr 17 19:40:54xUTC 2016

2019-08-04 01:30:32 (20828): Guest Log: ervi00:00:00.000511 main     Executable: /sbin/VBoxService

2019-08-04 01:30:32 (20828): Guest Log: 00:00:00.000513 main     Process ID: 921

2019-08-04 01:30:32 (20828): Guest Log: 00:00:00.000514 main     Package type: LINUX_64BITS_GENERIC 

2019-08-04 01:30:32 (20828): Guest Log: .0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log

2019-08-04 01:30:32 (20828): Guest Log: 00:00:00.001671 main     5.0.16 r105871 started. Verbose level = 0

2019-08-04 01:30:32 (20828): Guest Log: 00:00:00.000152 main     Log opened 2019-08-04T01:30:26.983454000Z

2019-08-04 01:30:32 (20828): Guest Log: 00:00:00.006333 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory

2019-08-04 01:30:32 (20828): Guest Log: 00:00:00.006428 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed

2019-08-04 01:30:32 (20828): Guest Log: 00:00:00.000314 main     OS Product: Linux

2019-08-04 01:30:32 (20828): Guest Log: 00:00:00.000380 main     OS Release: 4.1.19-boot2docker

2019-08-04 01:30:32 (20828): Guest Log: 00:00:00.000458 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016

2019-08-04 01:30:32 (20828): Guest Log: 00:00:00.000511 main     Executable: /sbin/VBoxService

2019-08-04 01:30:32 (20828): Guest Log: 00:00:00.000513 main     Process ID: 921

2019-08-04 01:30:32 (20828): Guest Log: 00:00:00.000514 main     Package type: LINUX_64BITS_GENERIC

2019-08-04 01:30:32 (20828): Guest Log: 00:00:00.001671 main     5.0.16 r105871 started. Verbose level = 0

2019-08-04 01:30:32 (20828): Guest Log: Mounting BOINC shared/...

2019-08-04 01:30:32 (20828): Guest Log: -------------------

2019-08-04 01:30:32 (20828): Guest Log: Sun Aug  4 05:30:29 UTC 2019

2019-08-04 01:30:37 (20828): Guest Log: 00:00:05.008559 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed

2019-08-04 01:30:37 (20828): Guest Log: Sun Aug  4 05:30:34 UTC 2019

2019-08-04 01:30:37 (20828): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 

2019-08-04 01:30:37 (20828): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00

2019-08-04 01:30:37 (20828): Guest Log:     inet 127.0.0.1/8 scope host lo

2019-08-04 01:30:37 (20828): Guest Log:        valid_lft forever preferred_lft forever

2019-08-04 01:30:37 (20828): Guest Log:     inet6 ::1/128 scope host 

2019-08-04 01:30:37 (20828): Guest Log:        valid_lft forever preferred_lft forever

2019-08-04 01:30:37 (20828): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 

2019-08-04 01:30:37 (20828): Guest Log:     link/ether f6:37:e9:c8:0e:96 brd ff:ff:ff:ff:ff:ff

2019-08-04 01:30:37 (20828): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000

2019-08-04 01:30:37 (20828): Guest Log:     link/ether 08:00:27:92:4e:72 brd ff:ff:ff:ff:ff:ff

2019-08-04 01:30:37 (20828): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0

2019-08-04 01:30:37 (20828): Guest Log:        valid_lft forever preferred_lft forever

2019-08-04 01:30:37 (20828): Guest Log:     inet6 fe80::a00:27ff:fe92:4e72/64 scope link 

2019-08-04 01:30:37 (20828): Guest Log:        valid_lft forever preferred_lft forever

2019-08-04 01:30:37 (20828): Guest Log: -------------------

2019-08-04 01:30:37 (20828): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence

2019-08-04 01:30:37 (20828): Guest Log: Waiting for Docker daemon to start...

2019-08-04 01:30:37 (20828): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE

2019-08-04 01:30:37 (20828): Guest Log: Running boinc_app...

2019-08-04 01:30:37 (20828): Guest Log: Importing Docker image from BOINC...

2019-08-04 01:30:42 (20828): Guest Log: 00:00:10.009183 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed

2019-08-04 01:31:28 (20828): Guest Log: Prerun diagnostics...

2019-08-04 01:31:28 (20828): Guest Log: REPOSITORY                TAG                 IMAGE ID            CREATED             SIZE

2019-08-04 01:31:28 (20828): Guest Log: carlosred/autodock-vina   latest              f9dc0bf006e4        13 months ago       697 MB

2019-08-04 01:31:28 (20828): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES

2019-08-04 01:31:28 (20828): Guest Log: 705.2M	/var/lib/docker

2019-08-04 01:31:28 (20828): Guest Log:               total        used        free      shared  buff/cache   available

2019-08-04 01:31:28 (20828): Guest Log: Mem:           3219          59        2241         869         917        2244

2019-08-04 01:31:28 (20828): Guest Log: Swap:           754           0         754

2019-08-04 01:31:28 (20828): Guest Log: Prerun commands...

2019-08-04 01:31:28 (20828): Guest Log: Running... 

2019-08-04 01:31:28 (20828): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

2019-08-04 01:31:28 (20828): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed

2019-08-04 01:31:28 (20828): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-08-04 01:31:28 (20828): Guest Log:  26  211k   26 58235    0     0   164k      0  0:00:01 --:--:--  0:00:01  293k

2019-08-04 01:31:28 (20828): Guest Log: 100  211k  100  211k    0     0   446k      0 --:--:-- --:--:-- --:--:--  655k

2019-08-04 01:31:28 (20828): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

2019-08-04 01:31:28 (20828): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed

2019-08-04 01:31:28 (20828): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-08-04 01:31:28 (20828): Guest Log: 102  3878  102  3878    0     0  19269      0 --:--:-- --:--:-- --:--:-- 53123

2019-08-04 01:31:28 (20828): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

2019-08-04 01:31:28 (20828): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed

2019-08-04 01:31:28 (20828): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-08-04 01:31:28 (20828): Guest Log: 102  3983  102  3983    0     0  19900      0 --:--:-- --:--:-- --:--:-- 53106

2019-08-04 01:31:28 (20828): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

2019-08-04 01:31:28 (20828): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed

2019-08-04 01:31:28 (20828): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-08-04 01:31:28 (20828): Guest Log:  92  171k   92  158k    0     0   369k      0 --:--:-- --:--:-- --:--:--  549k

2019-08-04 01:31:28 (20828): Guest Log: 100  171k  100  171k    0     0   398k      0 --:--:-- --:--:-- --:--:--  588k

2019-08-04 01:31:28 (20828): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

2019-08-04 01:31:28 (20828): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed

2019-08-04 01:31:28 (20828): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-08-04 01:31:28 (20828): Guest Log: 102  3781  102  3781    0     0  24738      0 --:--:-- --:--:-- --:--:-- 52513

2019-08-04 01:31:28 (20828): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

2019-08-04 01:31:28 (20828): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed

2019-08-04 01:31:28 (20828): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-08-04 01:31:28 (20828): Guest Log: 102  3781  102  3781    0     0  23076      0 --:--:-- --:--:-- --:--:-- 53253

2019-08-04 01:31:28 (20828): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

2019-08-04 01:31:28 (20828): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed

2019-08-04 01:31:28 (20828): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-08-04 01:31:28 (20828): Guest Log: 157   157  157   157    0     0    613      0 --:--:-- --:--:-- --:--:--  2093

2019-08-04 01:31:28 (20828): Guest Log: #################################################################

2019-08-04 01:31:28 (20828): Guest Log: # If you used AutoDock Vina in your work, please cite:          #

2019-08-04 01:31:28 (20828): Guest Log: #                                                               #

2019-08-04 01:31:28 (20828): Guest Log: # O. Trott, A. J. Olson,                                        #

2019-08-04 01:31:28 (20828): Guest Log: # AutoDock Vina: improving the speed and accuracy of docking    #

2019-08-04 01:31:28 (20828): Guest Log: # with a new scoring function, efficient optimization and       #

2019-08-04 01:31:28 (20828): Guest Log: # multithreading, Journal of Computational Chemistry 31 (2010)  #

2019-08-04 01:31:28 (20828): Guest Log: # 455-461                                                       #

2019-08-04 01:31:28 (20828): Guest Log: #                                                               #

2019-08-04 01:31:28 (20828): Guest Log: # DOI 10.1002/jcc.21334                                         #

2019-08-04 01:31:28 (20828): Guest Log: #                                                               #

2019-08-04 01:31:28 (20828): Guest Log: # Please see http://vina.scripps.edu for more information.      #

2019-08-04 01:31:28 (20828): Guest Log: #################################################################

2019-08-04 01:31:28 (20828): Guest Log: Reading input ... done.

2019-08-04 01:31:33 (20828): Guest Log: Setting up the scoring function ... done.

2019-08-04 01:31:33 (20828): Guest Log: Analyzing the binding site ... done.

2019-08-04 01:31:33 (20828): Guest Log: Using random seed: 867434304

2019-08-04 01:31:33 (20828): Guest Log: Performing search ... 

2019-08-04 01:31:33 (20828): Guest Log: 0%   10   20   30   40   50   60   70   80   90   100%

2019-08-04 01:31:33 (20828): Guest Log: |----|----|----|----|----|----|----|----|----|----|

2019-08-04 01:35:08 (20828): VM state change detected. (old = 'running', new = 'paused')
2019-08-04 01:35:13 (20828): Error 0x80bb0002 in vbox52::VBOX_VM::resume (c:\users\david\documents\boinc_git\boinc\samples\vboxwrapper\vbox_mscom_impl.cpp:1599)
2019-08-04 01:35:13 (20828): Error Source     : ConsoleWrap
2019-08-04 01:35:13 (20828): Error Description: VM is paused due to host power management
2019-08-04 01:35:18 (20828): Error 0x80bb0002 in vbox52::VBOX_VM::resume (c:\users\david\documents\boinc_git\boinc\samples\vboxwrapper\vbox_mscom_impl.cpp:1599)
2019-08-04 01:35:18 (20828): Error Source     : ConsoleWrap
2019-08-04 01:35:18 (20828): Error Description: VM is paused due to host power management
2019-08-04 01:35:23 (20828): Error 0x80bb0002 in vbox52::VBOX_VM::resume (c:\users\david\documents\boinc_git\boinc\samples\vboxwrapper\vbox_mscom_impl.cpp:1599)
2019-08-04 01:35:23 (20828): Error Source     : ConsoleWrap
2019-08-04 01:35:23 (20828): Error Description: VM is paused due to host power management
2019-08-04 01:35:28 (20828): Powering off VM.
2019-08-04 01:35:29 (20828): Successfully stopped VM.
2019-08-04 03:00:24 (22664): vboxwrapper (7.9.26200): starting
2019-08-04 03:00:24 (22664): Feature: Checkpoint interval offset (155 seconds)
2019-08-04 03:00:24 (22664): Detected: VirtualBox COM Interface (Version: 5.2.8)
2019-08-04 03:00:24 (22664): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-08-04 03:00:24 (22664): Guest Log: BIOS: VirtualBox 5.2.8

2019-08-04 03:00:24 (22664): Guest Log: CPUID EDX: 0x178bfbff

2019-08-04 03:00:24 (22664): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032

2019-08-04 03:00:24 (22664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80

2019-08-04 03:00:24 (22664): Guest Log: BIOS: Boot from Hard Disk 0 failed

2019-08-04 03:00:24 (22664): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003

2019-08-04 03:00:24 (22664): Guest Log: BIOS: Booting from CD-ROM...

2019-08-04 03:00:24 (22664): Guest Log: BIOS: KBD: unsupported int 16h function 03

2019-08-04 03:00:24 (22664): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 

2019-08-04 03:00:24 (22664): Guest Log: net.ipv4.ip_forward = 1

2019-08-04 03:00:24 (22664): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory

2019-08-04 03:00:24 (22664): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory

2019-08-04 03:00:24 (22664): Guest Log: sysctl: "cannot stat %s" is an unknown key

2019-08-04 03:00:24 (22664): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory

2019-08-04 03:00:24 (22664): Guest Log: Segmentation fault

2019-08-04 03:00:24 (22664): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds

2019-08-04 03:00:24 (22664): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)

2019-08-04 03:00:24 (22664): Guest Log: automount ...

2019-08-04 03:00:24 (22664): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string

2019-08-04 03:00:24 (22664): Guest Log: automount over.

2019-08-04 03:00:24 (22664): Guest Log: Setting hostname to boot2docker Done.

2019-08-04 03:00:24 (22664): Guest Log: Sun Aug  4 01:30:20 UTC 2019 dhcp -------------------------------

2019-08-04 03:00:24 (22664): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:

2019-08-04 03:00:24 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1114)

2019-08-04 03:00:24 (22664): Guest Log:   /sys/devices/LNXSYSTM:00 (1352)

2019-08-04 03:00:24 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:00 (1353)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:01 (1354)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:02 (1355)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:03 (1356)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00 (1357)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0 (1358)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0/event0 (1359)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00 (1360)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1361)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1362)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00 (1363)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1364)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1365)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1366)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1367)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1368)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6 (1369)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6/event5 (1370)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1371)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1372)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1373)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1374)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1375)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1376)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1377)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1378)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1379)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1380)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1381)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1382)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1383)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1384)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1385)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1386)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1387)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1388)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1389)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1390)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1391)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1392)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1393)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1394)

2019-08-04 03:00:25 (22664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1395)

2019-08-04 03:00:25 (22664): Guest Log: Sun Aug  4 01:30:26 UTC 2019 dhcp -------------------------------

2019-08-04 03:00:25 (22664): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log

2019-08-04 03:00:25 (22664): Guest Log: 00:00:00.000152 main     Log opened 2019-08-04T01:30:26.983454000Z

2019-08-04 03:00:25 (22664): Guest Log: 00:00:00.000314 main     OS Product: Linux

2019-08-04 03:00:25 (22664): Guest Log: 00:00:00.000380 main     OS Release: 4.1.19-boot2docker

2019-08-04 03:00:25 (22664): Guest Log: VBo00:00:00.000458 main     OS Version: #1 SMP Sun Apr 17 19:40:54xUTC 2016

2019-08-04 03:00:25 (22664): Guest Log: ervi00:00:00.000511 main     Executable: /sbin/VBoxService

2019-08-04 03:00:25 (22664): Guest Log: 00:00:00.000513 main     Process ID: 921

2019-08-04 03:00:25 (22664): Guest Log: 00:00:00.000514 main     Package type: LINUX_64BITS_GENERIC 

2019-08-04 03:00:25 (22664): Guest Log: .0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log

2019-08-04 03:00:25 (22664): Guest Log: 00:00:00.001671 main     5.0.16 r105871 started. Verbose level = 0

2019-08-04 03:00:25 (22664): Guest Log: 00:00:00.000152 main     Log opened 2019-08-04T01:30:26.983454000Z

2019-08-04 03:00:25 (22664): Guest Log: 00:00:00.006333 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory

2019-08-04 03:00:25 (22664): Guest Log: 00:00:00.006428 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed

2019-08-04 03:00:25 (22664): Guest Log: 00:00:00.000314 main     OS Product: Linux

2019-08-04 03:00:25 (22664): Guest Log: 00:00:00.000380 main     OS Release: 4.1.19-boot2docker

2019-08-04 03:00:25 (22664): Guest Log: 00:00:00.000458 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016

2019-08-04 03:00:25 (22664): Guest Log: 00:00:00.000511 main     Executable: /sbin/VBoxService

2019-08-04 03:00:25 (22664): Guest Log: 00:00:00.000513 main     Process ID: 921

2019-08-04 03:00:25 (22664): Guest Log: 00:00:00.000514 main     Package type: LINUX_64BITS_GENERIC

2019-08-04 03:00:25 (22664): Guest Log: 00:00:00.001671 main     5.0.16 r105871 started. Verbose level = 0

2019-08-04 03:00:25 (22664): Guest Log: Mounting BOINC shared/...

2019-08-04 03:00:25 (22664): Guest Log: -------------------

2019-08-04 03:00:25 (22664): Guest Log: Sun Aug  4 05:30:29 UTC 2019

2019-08-04 03:00:25 (22664): Guest Log: 00:00:05.008559 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed

2019-08-04 03:00:25 (22664): Guest Log: Sun Aug  4 05:30:34 UTC 2019

2019-08-04 03:00:25 (22664): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 

2019-08-04 03:00:25 (22664): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00

2019-08-04 03:00:25 (22664): Guest Log:     inet 127.0.0.1/8 scope host lo

2019-08-04 03:00:25 (22664): Guest Log:        valid_lft forever preferred_lft forever

2019-08-04 03:00:25 (22664): Guest Log:     inet6 ::1/128 scope host 

2019-08-04 03:00:25 (22664): Guest Log:        valid_lft forever preferred_lft forever

2019-08-04 03:00:25 (22664): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 

2019-08-04 03:00:25 (22664): Guest Log:     link/ether f6:37:e9:c8:0e:96 brd ff:ff:ff:ff:ff:ff

2019-08-04 03:00:25 (22664): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000

2019-08-04 03:00:25 (22664): Guest Log:     link/ether 08:00:27:92:4e:72 brd ff:ff:ff:ff:ff:ff

2019-08-04 03:00:25 (22664): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0

2019-08-04 03:00:25 (22664): Guest Log:        valid_lft forever preferred_lft forever

2019-08-04 03:00:25 (22664): Guest Log:     inet6 fe80::a00:27ff:fe92:4e72/64 scope link 

2019-08-04 03:00:25 (22664): Guest Log:        valid_lft forever preferred_lft forever

2019-08-04 03:00:25 (22664): Guest Log: -------------------

2019-08-04 03:00:25 (22664): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence

2019-08-04 03:00:25 (22664): Guest Log: Waiting for Docker daemon to start...

2019-08-04 03:00:25 (22664): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE

2019-08-04 03:00:25 (22664): Guest Log: Running boinc_app...

2019-08-04 03:00:25 (22664): Guest Log: Importing Docker image from BOINC...

2019-08-04 03:00:25 (22664): Guest Log: 00:00:10.009183 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed

2019-08-04 03:00:25 (22664): Guest Log: Prerun diagnostics...

2019-08-04 03:00:25 (22664): Guest Log: REPOSITORY                TAG                 IMAGE ID            CREATED             SIZE

2019-08-04 03:00:25 (22664): Guest Log: carlosred/autodock-vina   latest              f9dc0bf006e4        13 months ago       697 MB

2019-08-04 03:00:25 (22664): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES

2019-08-04 03:00:25 (22664): Guest Log: 705.2M	/var/lib/docker

2019-08-04 03:00:25 (22664): Guest Log:               total        used        free      shared  buff/cache   available

2019-08-04 03:00:25 (22664): Guest Log: Mem:           3219          59        2241         869         917        2244

2019-08-04 03:00:25 (22664): Guest Log: Swap:           754           0         754

2019-08-04 03:00:25 (22664): Guest Log: Prerun commands...

2019-08-04 03:00:25 (22664): Guest Log: Running... 

2019-08-04 03:00:25 (22664): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

2019-08-04 03:00:25 (22664): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed

2019-08-04 03:00:25 (22664): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-08-04 03:00:25 (22664): Guest Log:  26  211k   26 58235    0     0   164k      0  0:00:01 --:--:--  0:00:01  293k

2019-08-04 03:00:25 (22664): Guest Log: 100  211k  100  211k    0     0   446k      0 --:--:-- --:--:-- --:--:--  655k

2019-08-04 03:00:25 (22664): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

2019-08-04 03:00:25 (22664): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed

2019-08-04 03:00:25 (22664): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-08-04 03:00:25 (22664): Guest Log: 102  3878  102  3878    0     0  19269      0 --:--:-- --:--:-- --:--:-- 53123

2019-08-04 03:00:25 (22664): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

2019-08-04 03:00:25 (22664): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed

2019-08-04 03:00:25 (22664): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-08-04 03:00:25 (22664): Guest Log: 102  3983  102  3983    0     0  19900      0 --:--:-- --:--:-- --:--:-- 53106

2019-08-04 03:00:25 (22664): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

2019-08-04 03:00:25 (22664): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed

2019-08-04 03:00:25 (22664): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-08-04 03:00:25 (22664): Guest Log:  92  171k   92  158k    0     0   369k      0 --:--:-- --:--:-- --:--:--  549k

2019-08-04 03:00:25 (22664): Guest Log: 100  171k  100  171k    0     0   398k      0 --:--:-- --:--:-- --:--:--  588k

2019-08-04 03:00:25 (22664): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

2019-08-04 03:00:25 (22664): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed

2019-08-04 03:00:25 (22664): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-08-04 03:00:25 (22664): Guest Log: 102  3781  102  3781    0     0  24738      0 --:--:-- --:--:-- --:--:-- 52513

2019-08-04 03:00:25 (22664): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

2019-08-04 03:00:25 (22664): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed

2019-08-04 03:00:25 (22664): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-08-04 03:00:25 (22664): Guest Log: 102  3781  102  3781    0     0  23076      0 --:--:-- --:--:-- --:--:-- 53253

2019-08-04 03:00:25 (22664): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

2019-08-04 03:00:25 (22664): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed

2019-08-04 03:00:25 (22664): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-08-04 03:00:25 (22664): Guest Log: 157   157  157   157    0     0    613      0 --:--:-- --:--:-- --:--:--  2093

2019-08-04 03:00:25 (22664): Guest Log: #################################################################

2019-08-04 03:00:25 (22664): Guest Log: # If you used AutoDock Vina in your work, please cite:          #

2019-08-04 03:00:25 (22664): Guest Log: #                                                               #

2019-08-04 03:00:25 (22664): Guest Log: # O. Trott, A. J. Olson,                                        #

2019-08-04 03:00:25 (22664): Guest Log: # AutoDock Vina: improving the speed and accuracy of docking    #

2019-08-04 03:00:25 (22664): Guest Log: # with a new scoring function, efficient optimization and       #

2019-08-04 03:00:25 (22664): Guest Log: # multithreading, Journal of Computational Chemistry 31 (2010)  #

2019-08-04 03:00:25 (22664): Guest Log: # 455-461                                                       #

2019-08-04 03:00:25 (22664): Guest Log: #                                                               #

2019-08-04 03:00:25 (22664): Guest Log: # DOI 10.1002/jcc.21334                                         #

2019-08-04 03:00:25 (22664): Guest Log: #                                                               #

2019-08-04 03:00:25 (22664): Guest Log: # Please see http://vina.scripps.edu for more information.      #

2019-08-04 03:00:25 (22664): Guest Log: #################################################################

2019-08-04 03:00:25 (22664): Guest Log: Reading input ... done.

2019-08-04 03:00:25 (22664): Guest Log: Setting up the scoring function ... done.

2019-08-04 03:00:25 (22664): Guest Log: Analyzing the binding site ... done.

2019-08-04 03:00:25 (22664): Guest Log: Using random seed: 867434304

2019-08-04 03:00:25 (22664): Guest Log: Performing search ... 

2019-08-04 03:00:25 (22664): Guest Log: 0%   10   20   30   40   50   60   70   80   90   100%

2019-08-04 03:00:25 (22664): Guest Log: |----|----|----|----|----|----|----|----|----|----|

2019-08-04 03:00:25 (22664): Starting VM. (boinc_272a2fd25664af05, slot#10)
2019-08-04 03:00:48 (22664): Successfully started VM. (PID = '15612')
2019-08-04 03:00:48 (22664): Reporting VM Process ID to BOINC.
2019-08-04 03:00:53 (22664): VM state change detected. (old = 'poweroff', new = 'running')
2019-08-04 03:01:03 (22664): Preference change detected
2019-08-04 03:01:03 (22664): Setting CPU throttle for VM. (100%)
2019-08-04 03:01:04 (22664): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2019-08-04 03:02:46 (22664): Guest Log: Prerun diagnostics...

2019-08-04 03:02:46 (22664): Guest Log: REPOSITORY                TAG                 IMAGE ID            CREATED             SIZE

2019-08-04 03:02:46 (22664): Guest Log: carlosred/autodock-vina   latest              f9dc0bf006e4        13 months ago       697 MB

2019-08-04 03:02:46 (22664): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES

2019-08-04 03:02:46 (22664): Guest Log: 705.2M	/var/lib/docker

2019-08-04 03:02:46 (22664): Guest Log:               total        used        free      shared  buff/cache   available

2019-08-04 03:02:46 (22664): Guest Log: Mem:           3219          53        2247         869         917        2250

2019-08-04 03:02:46 (22664): Guest Log: Swap:           752           0         752

2019-08-04 03:02:46 (22664): Guest Log: Prerun commands...

2019-08-04 03:02:46 (22664): Guest Log: Running... 

2019-08-04 03:02:51 (22664): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

2019-08-04 03:02:51 (22664): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed

2019-08-04 03:02:51 (22664): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-08-04 03:02:51 (22664): Guest Log:   3  211k    3  6987    0     0   7606      0  0:00:28 --:--:--  0:00:28  9378

2019-08-04 03:02:51 (22664): Guest Log: 100  211k  100  211k    0     0   227k      0 --:--:-- --:--:-- --:--:--  279k

2019-08-04 03:02:51 (22664): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

2019-08-04 03:02:51 (22664): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed

2019-08-04 03:02:51 (22664): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-08-04 03:02:51 (22664): Guest Log: 102  3878  102  3878    0     0  18866      0 --:--:-- --:--:-- --:--:-- 55400

2019-08-04 03:02:52 (22664): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

2019-08-04 03:02:52 (22664): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed

2019-08-04 03:02:52 (22664): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-08-04 03:02:52 (22664): Guest Log: 102  3983  102  3983    0     0  20493      0 --:--:-- --:--:-- --:--:-- 57724

2019-08-04 03:02:52 (22664): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

2019-08-04 03:02:52 (22664): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed

2019-08-04 03:02:52 (22664): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-08-04 03:02:52 (22664): Guest Log:   1  171k    1  2682    0     0  13418      0  0:00:13 --:--:--  0:00:13 36739

2019-08-04 03:02:52 (22664): Guest Log: 100  171k  100  171k    0     0   403k      0 --:--:-- --:--:-- --:--:--  575k

2019-08-04 03:02:52 (22664): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

2019-08-04 03:02:52 (22664): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed

2019-08-04 03:02:52 (22664): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-08-04 03:02:52 (22664): Guest Log: 102  3781  102  3781    0     0  17736      0 --:--:-- --:--:-- --:--:-- 51094

2019-08-04 03:02:52 (22664): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

2019-08-04 03:02:52 (22664): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed

2019-08-04 03:02:52 (22664): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-08-04 03:02:52 (22664): Guest Log: 102  3781  102  3781    0     0  25087      0 --:--:-- --:--:-- --:--:-- 53253

2019-08-04 03:02:52 (22664): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current

2019-08-04 03:02:52 (22664): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed

2019-08-04 03:02:52 (22664): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0

2019-08-04 03:02:52 (22664): Guest Log: 157   157  157   157    0     0    747      0 --:--:-- --:--:-- --:--:--  2012

2019-08-04 03:02:52 (22664): Guest Log: #################################################################

2019-08-04 03:02:52 (22664): Guest Log: # If you used AutoDock Vina in your work, please cite:          #

2019-08-04 03:02:52 (22664): Guest Log: #                                                               #

2019-08-04 03:02:52 (22664): Guest Log: # O. Trott, A. J. Olson,                                        #

2019-08-04 03:02:52 (22664): Guest Log: # AutoDock Vina: improving the speed and accuracy of docking    #

2019-08-04 03:02:52 (22664): Guest Log: # with a new scoring function, efficient optimization and       #

2019-08-04 03:02:52 (22664): Guest Log: # multithreading, Journal of Computational Chemistry 31 (2010)  #

2019-08-04 03:02:52 (22664): Guest Log: # 455-461                                                       #

2019-08-04 03:02:52 (22664): Guest Log: #                                                               #

2019-08-04 03:02:52 (22664): Guest Log: # DOI 10.1002/jcc.21334                                         #

2019-08-04 03:02:52 (22664): Guest Log: #                                                               #

2019-08-04 03:02:52 (22664): Guest Log: # Please see http://vina.scripps.edu for more information.      #

2019-08-04 03:02:52 (22664): Guest Log: #################################################################

2019-08-04 03:02:52 (22664): Guest Log: Reading input ... done.

2019-08-04 03:02:52 (22664): Guest Log: Setting up the scoring function ... done.

2019-08-04 03:02:57 (22664): Guest Log: Analyzing the binding site ... done.

2019-08-04 03:02:57 (22664): Guest Log: Using random seed: -1862477355

2019-08-04 03:02:57 (22664): Guest Log: Performing search ... 

2019-08-04 03:02:57 (22664): Guest Log: 0%   10   20   30   40   50   60   70   80   90   100%

2019-08-04 03:02:57 (22664): Guest Log: |----|----|----|----|----|----|----|----|----|----|

2019-08-04 03:09:43 (22664): Guest Log: ***************************************************

2019-08-04 03:09:43 (22664): Guest Log: done.

2019-08-04 03:09:43 (22664): Guest Log: Refining results ... done.

2019-08-04 03:09:43 (22664): Guest Log: mode |   affinity | dist from best mode

2019-08-04 03:09:43 (22664): Guest Log:      | (kcal/mol) | rmsd l.b.| rmsd u.b.

2019-08-04 03:09:43 (22664): Guest Log: -----+------------+----------+----------

2019-08-04 03:09:43 (22664): Guest Log:    1        -12.3      0.000      0.000

2019-08-04 03:09:43 (22664): Guest Log:    2        -10.7      3.460     12.436

2019-08-04 03:09:43 (22664): Guest Log:    3        -10.5      2.560     12.592

2019-08-04 03:09:43 (22664): Guest Log:    4        -10.4      2.901     12.273

2019-08-04 03:09:43 (22664): Guest Log:    5        -10.3      3.325     13.806

2019-08-04 03:09:43 (22664): Guest Log:    6        -10.1      1.752     13.792

2019-08-04 03:09:43 (22664): Guest Log:    7         -9.8      1.942     13.910

2019-08-04 03:09:43 (22664): Guest Log:    8         -9.8      3.337     12.266

2019-08-04 03:09:43 (22664): Guest Log:    9         -9.3      1.824     14.012

2019-08-04 03:09:43 (22664): Guest Log: Writing output ... done.

2019-08-04 03:09:43 (22664): Guest Log: Postrun commands...

2019-08-04 03:09:43 (22664): Guest Log: boinc_app exited (0)

2019-08-04 03:09:43 (22664): Guest Log: Saving results...

2019-08-04 03:09:43 (22664): Guest Log: 1OPK.pdbqt

2019-08-04 03:09:43 (22664): Guest Log: ZINC00000567.pdbqt

2019-08-04 03:09:43 (22664): Guest Log: all.pdbqt

2019-08-04 03:09:43 (22664): Guest Log: ligand.pdbqt

2019-08-04 03:09:43 (22664): Guest Log: ligand_experiment.pdbqt

2019-08-04 03:09:43 (22664): Guest Log: protein.pdbqt

2019-08-04 03:09:43 (22664): VM Completion File Detected.
2019-08-04 03:09:43 (22664): Powering off VM.
2019-08-04 03:09:45 (22664): Successfully stopped VM.
2019-08-04 03:09:50 (22664): Deregistering VM. (boinc_272a2fd25664af05, slot#10)
2019-08-04 03:09:50 (22664): Removing virtual disk drive(s) from VM.
2019-08-04 03:09:50 (22664): Removing network bandwidth throttle group from VM.
2019-08-04 03:09:50 (22664): Removing storage controller(s) from VM.
2019-08-04 03:09:52 (22664): Removing VM from VirtualBox.
03:09:57 (22664): called boinc_finish(0)

</stderr_txt>
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