Task 240800
| Name | boinc2docker_21004_1563486446.509925_3 |
| Workunit | 106336 |
| Created | 19 Jul 2019, 22:19:28 UTC |
| Sent | 19 Jul 2019, 22:19:41 UTC |
| Report deadline | 26 Jul 2019, 22:19:41 UTC |
| Received | 19 Jul 2019, 22:30:19 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 277 |
| Run time | 2 min 5 sec |
| CPU time | 1 min 55 sec |
| Validate state | Valid |
| Credit | 4.10 |
| Device peak FLOPS | 15.25 GFLOPS |
| Application version | boinc2docker v1.07 (vbox64_mt) x86_64-apple-darwin |
| Peak working set size | 146.07 MB |
| Peak swap size | 6,544.46 MB |
| Peak disk usage | 676.98 MB |
Stderr output
<core_client_version>7.14.2</core_client_version>
<![CDATA[
<stderr_txt>
2019-07-19 17:28:03 (40722): vboxwrapper (7.7.26197): starting
2019-07-19 17:28:04 (40722): Feature: Checkpoint interval offset (549 seconds)
2019-07-19 17:28:04 (40722): Detected: VirtualBox VboxManage Interface (Version: 6.0.8)
2019-07-19 17:28:04 (40722): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-07-19 17:28:04 (40722): Create VM. (boinc_6f2674dc5c670db0, slot#34)
2019-07-19 17:28:04 (40722): Updating drive controller type and model for desired configuration.
2019-07-19 17:28:04 (40722): Setting Memory Size for VM. (6392MB)
2019-07-19 17:28:04 (40722): Setting CPU Count for VM. (4)
2019-07-19 17:28:04 (40722): Setting Chipset Options for VM.
2019-07-19 17:28:04 (40722): Setting Boot Options for VM.
2019-07-19 17:28:04 (40722): Setting Network Configuration for NAT.
2019-07-19 17:28:05 (40722): Enabling VM Network Access.
2019-07-19 17:28:05 (40722): Disabling USB Support for VM.
2019-07-19 17:28:05 (40722): Disabling COM Port Support for VM.
2019-07-19 17:28:05 (40722): Disabling LPT Port Support for VM.
2019-07-19 17:28:05 (40722): Disabling Audio Support for VM.
2019-07-19 17:28:05 (40722): Disabling Clipboard Support for VM.
2019-07-19 17:28:05 (40722): Disabling Drag and Drop Support for VM.
2019-07-19 17:28:05 (40722): Adding storage controller(s) to VM.
2019-07-19 17:28:05 (40722): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2019-07-19 17:28:06 (40722): Adding VirtualBox Guest Additions to VM.
2019-07-19 17:28:06 (40722): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-07-19 17:28:06 (40722): Enabling shared directory for VM.
2019-07-19 17:28:06 (40722): Starting VM. (boinc_6f2674dc5c670db0, slot#34)
2019-07-19 17:28:08 (40722): Successfully started VM. (PID = '41231')
2019-07-19 17:28:08 (40722): Reporting VM Process ID to BOINC.
2019-07-19 17:28:08 (40722): Guest Log: BIOS: VirtualBox 6.0.8
2019-07-19 17:28:08 (40722): Guest Log: CPUID EDX: 0x178bfbff
2019-07-19 17:28:08 (40722): VM state change detected. (old = 'poweroff', new = 'running')
2019-07-19 17:28:08 (40722): Preference change detected
2019-07-19 17:28:08 (40722): Setting CPU throttle for VM. (100%)
2019-07-19 17:28:08 (40722): Setting checkpoint interval to 1800 seconds. (Higher value of (Preference: 1800 seconds) or (Vbox_job.xml: 600 seconds))
2019-07-19 17:28:10 (40722): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-07-19 17:28:10 (40722): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2019-07-19 17:28:10 (40722): Guest Log: BIOS: Boot from Hard Disk 0 failed
2019-07-19 17:28:10 (40722): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2019-07-19 17:28:10 (40722): Guest Log: BIOS: Booting from CD-ROM...
2019-07-19 17:28:14 (40722): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-07-19 17:28:14 (40722): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000
2019-07-19 17:28:26 (40722): Guest Log: net.ipv4.ip_forward = 1
2019-07-19 17:28:26 (40722): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2019-07-19 17:28:26 (40722): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-07-19 17:28:26 (40722): Guest Log: sysctl: "cannot stat %s" is an unknown key
2019-07-19 17:28:26 (40722): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-07-19 17:28:26 (40722): Guest Log: Segmentation fault
2019-07-19 17:28:26 (40722): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-07-19 17:28:26 (40722): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-07-19 17:28:26 (40722): Guest Log: automount ...
2019-07-19 17:28:26 (40722): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2019-07-19 17:28:26 (40722): Guest Log: automount over.
2019-07-19 17:28:26 (40722): Guest Log: [1;32mSetting hostname to [1;35mboot2docker[0;39m [1;32mDone.[0;39m
2019-07-19 17:28:26 (40722): Guest Log: Fri Jul 19 17:28:23 UTC 2019 dhcp -------------------------------
2019-07-19 17:28:31 (40722): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1114)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00 (1350)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXCPU:00 (1351)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXCPU:01 (1352)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXCPU:02 (1353)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXCPU:03 (1354)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00 (1355)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0 (1356)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0/event0 (1357)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00 (1358)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1359)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1360)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00 (1361)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1362)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1363)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1364)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1365)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1366)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input7 (1367)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input7/event5 (1368)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1369)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1370)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1371)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1372)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1373)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1374)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1375)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1376)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1377)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1378)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1379)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1380)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1381)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1382)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1383)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1384)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1385)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1386)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1387)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1388)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1389)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1390)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1391)
2019-07-19 17:28:31 (40722): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1392)
2019-07-19 17:28:32 (40722): Guest Log: Fri Jul 19 17:28:29 UTC 2019 dhcp -------------------------------
2019-07-19 17:28:32 (40722): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log
2019-07-19 17:28:32 (40722): Guest Log: 00:00:00.000116 main Log opened 2019-07-19T17:28:29.599673000Z
2019-07-19 17:28:32 (40722): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log
2019-07-19 17:28:32 (40722): Guest Log: 00:00:00.000116 main Log opened 2019-07-19T17:28:29.599673000Z
2019-07-19 17:28:32 (40722): Guest Log: 00:00:00.003768 main OS Product: Linux
2019-07-19 17:28:32 (40722): Guest Log: 00:00:00.003768 main OS Product: Linux
2019-07-19 17:28:32 (40722): Guest Log: 00:00:00.004907 main OS Release: 4.1.19-boot2docker
2019-07-19 17:28:32 (40722): Guest Log: 00:00:00.004907 main OS Release: 4.1.19-boot2docker
2019-07-19 17:28:32 (40722): Guest Log: 00:00:00.006217 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-07-19 17:28:32 (40722): Guest Log: 00:00:00.006217 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-07-19 17:28:32 (40722): Guest Log: 00:00:00.007800 main Executable: /sbin/VBoxService
2019-07-19 17:28:32 (40722): Guest Log: 00:00:00.007802 main Process ID: 924
2019-07-19 17:28:32 (40722): Guest Log: 00:00:00.007803 main Package type: LINUX_64BITS_GENERIC
2019-07-19 17:28:32 (40722): Guest Log: 00:00:00.007800 main Executable: /sbin/VBoxService
2019-07-19 17:28:32 (40722): Guest Log: 00:00:00.007802 main Process ID: 924
2019-07-19 17:28:32 (40722): Guest Log: 00:00:00.007803 main Package type: LINUX_64BITS_GENERIC
2019-07-19 17:28:32 (40722): Guest Log: 00:00:00.012484 main 5.0.16 r105871 started. Verbose level = 0
2019-07-19 17:28:32 (40722): Guest Log: 00:00:00.012484 main 5.0.16 r105871 started. Verbose level = 0
2019-07-19 17:28:32 (40722): Guest Log: 00:00:00.015088 vminfo rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2019-07-19 17:28:32 (40722): Guest Log: 00:00:00.015160 vminfo Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2019-07-19 17:28:32 (40722): Guest Log: Mounting BOINC shared/...
2019-07-19 17:28:32 (40722): Guest Log: -------------------
2019-07-19 17:28:32 (40722): Guest Log: Fri Jul 19 22:28:32 UTC 2019
2019-07-19 17:28:37 (40722): Guest Log: 00:00:05.016414 vminfo Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2019-07-19 17:28:37 (40722): Guest Log: Fri Jul 19 22:28:37 UTC 2019
2019-07-19 17:28:37 (40722): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default
2019-07-19 17:28:37 (40722): Guest Log: link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2019-07-19 17:28:37 (40722): Guest Log: inet 127.0.0.1/8 scope host lo
2019-07-19 17:28:37 (40722): Guest Log: valid_lft forever preferred_lft forever
2019-07-19 17:28:37 (40722): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default
2019-07-19 17:28:37 (40722): Guest Log: link/ether 86:06:eb:23:d3:4b brd ff:ff:ff:ff:ff:ff
2019-07-19 17:28:37 (40722): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2019-07-19 17:28:37 (40722): Guest Log: link/ether 08:00:27:3b:e3:c6 brd ff:ff:ff:ff:ff:ff
2019-07-19 17:28:37 (40722): Guest Log: inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2019-07-19 17:28:37 (40722): Guest Log: valid_lft forever preferred_lft forever
2019-07-19 17:28:37 (40722): Guest Log: -------------------
2019-07-19 17:28:37 (40722): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2019-07-19 17:28:37 (40722): Guest Log: Waiting for Docker daemon to start...
2019-07-19 17:28:39 (40722): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE
2019-07-19 17:28:39 (40722): Guest Log: Running boinc_app...
2019-07-19 17:28:39 (40722): Guest Log: Importing Docker image from BOINC...
2019-07-19 17:28:42 (40722): Guest Log: 00:00:10.017045 vminfo Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2019-07-19 17:29:51 (40722): Guest Log: Prerun diagnostics...
2019-07-19 17:29:51 (40722): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE
2019-07-19 17:29:51 (40722): Guest Log: carlosred/mpi-lammps latest 010869c6d9b8 12 months ago 1.473 GB
2019-07-19 17:29:51 (40722): Guest Log: CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
2019-07-19 17:29:51 (40722): Guest Log: 1.4G /var/lib/docker
2019-07-19 17:29:51 (40722): Guest Log: total used free shared buff/cache available
2019-07-19 17:29:51 (40722): Guest Log: Mem: 6204 64 4447 1634 1692 4449
2019-07-19 17:29:51 (40722): Guest Log: Swap: 1499 0 1499
2019-07-19 17:29:51 (40722): Guest Log: Prerun commands...
2019-07-19 17:29:51 (40722): Guest Log: Running...
2019-07-19 17:29:52 (40722): Guest Log: % Total % Received % Xferd Average Speed Time Time Time Current
2019-07-19 17:29:52 (40722): Guest Log: Dload Upload Total Spent Left Speed
2019-07-19 17:29:55 (40722): Guest Log: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
2019-07-19 17:29:55 (40722): Guest Log: 0 0 0 0 0 0 0 0 --:--:-- 0:00:01 --:--:-- 0
2019-07-19 17:29:55 (40722): Guest Log: 0 0 0 0 0 0 0 0 --:--:-- 0:00:02 --:--:-- 0
2019-07-19 17:29:55 (40722): Guest Log: 3 762k 3 25923 0 0 9501 0 0:01:22 0:00:02 0:01:20 9499
2019-07-19 17:29:55 (40722): Guest Log: 100 762k 100 762k 0 0 221k 0 0:00:03 0:00:03 --:--:-- 222k
2019-07-19 17:29:55 (40722): Guest Log: % Total % Received % Xferd Average Speed Time Time Time Current
2019-07-19 17:29:55 (40722): Guest Log: Dload Upload Total Spent Left Speed
2019-07-19 17:29:59 (40722): Guest Log: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
2019-07-19 17:29:59 (40722): Guest Log: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
2019-07-19 17:29:59 (40722): Guest Log: 0 0 0 0 0 0 0 0 --:--:-- 0:00:01 --:--:-- 0
2019-07-19 17:29:59 (40722): Guest Log: 0 0 0 0 0 0 0 0 --:--:-- 0:00:02 --:--:-- 0
2019-07-19 17:29:59 (40722): Guest Log: 0 0 0 0 0 0 0 0 --:--:-- 0:00:03 --:--:-- 0
2019-07-19 17:29:59 (40722): Guest Log: 100 1272 100 1272 0 0 347 0 0:00:03 0:00:03 --:--:-- 347
2019-07-19 17:30:00 (40722): Guest Log: Postrun commands...
2019-07-19 17:30:00 (40722): Guest Log: boinc_app exited (0)
2019-07-19 17:30:00 (40722): Guest Log: Saving results...
2019-07-19 17:30:00 (40722): Guest Log: lammps_test.txt
2019-07-19 17:30:00 (40722): VM Completion File Detected.
2019-07-19 17:30:00 (40722): Powering off VM.
2019-07-19 17:30:01 (40722): Successfully stopped VM.
2019-07-19 17:30:01 (40722): Deregistering VM. (boinc_6f2674dc5c670db0, slot#34)
2019-07-19 17:30:01 (40722): Removing network bandwidth throttle group from VM.
2019-07-19 17:30:01 (40722): Removing storage controller(s) from VM.
2019-07-19 17:30:01 (40722): Removing VM from VirtualBox.
2019-07-19 17:30:01 (40722): Removing virtual ISO 9660 disk from VirtualBox.
17:30:06 (40722): called boinc_finish(0)
</stderr_txt>
]]>