Task 235037
Name | boinc2docker_10351_1560965787.847785_1 |
Workunit | 104957 |
Created | 19 Jun 2019, 17:36:29 UTC |
Sent | 19 Jun 2019, 18:58:58 UTC |
Report deadline | 26 Jun 2019, 18:58:58 UTC |
Received | 20 Jun 2019, 4:22:49 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 1540 |
Run time | 3 min 59 sec |
CPU time | 2 min 35 sec |
Validate state | Valid |
Credit | 5.21 |
Device peak FLOPS | 12.84 GFLOPS |
Application version | boinc2docker v1.07 (vbox64_mt) x86_64-pc-linux-gnu |
Peak working set size | 111.77 MB |
Peak swap size | 141.84 MB |
Peak disk usage | 676.98 MB |
Stderr output
<core_client_version>7.8.3</core_client_version> <![CDATA[ <stderr_txt> 2019-06-19 21:18:37 (17440): vboxwrapper (7.9.26200): starting 2019-06-19 21:18:37 (17440): Feature: Checkpoint interval offset (443 seconds) 2019-06-19 21:18:37 (17440): Detected: VirtualBox COM Interface (Version: 5.2.28) 2019-06-19 21:18:37 (17440): Detected: Minimum checkpoint interval (600.000000 seconds) 2019-06-19 21:18:37 (17440): Create VM. (boinc_c2af959126f5124e, slot#0) 2019-06-19 21:18:37 (17440): Updating drive controller type and model for desired configuration. 2019-06-19 21:18:37 (17440): Setting Memory Size for VM. (6392MB) 2019-06-19 21:18:37 (17440): Setting CPU Count for VM. (4) 2019-06-19 21:18:37 (17440): Setting Chipset Options for VM. 2019-06-19 21:18:37 (17440): Setting Boot Options for VM. 2019-06-19 21:18:37 (17440): Enabling VM Network Access. 2019-06-19 21:18:37 (17440): Setting Network Configuration for NAT. 2019-06-19 21:18:37 (17440): Disabling USB Support for VM. 2019-06-19 21:18:37 (17440): Disabling COM Port Support for VM. 2019-06-19 21:18:37 (17440): Disabling LPT Port Support for VM. 2019-06-19 21:18:37 (17440): Disabling Audio Support for VM. 2019-06-19 21:18:37 (17440): Disabling Clipboard Support for VM. 2019-06-19 21:18:37 (17440): Disabling Drag and Drop Support for VM. 2019-06-19 21:18:37 (17440): Adding storage controller(s) to VM. 2019-06-19 21:18:37 (17440): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso) 2019-06-19 21:18:37 (17440): Adding VirtualBox Guest Additions to VM. 2019-06-19 21:18:37 (17440): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB) 2019-06-19 21:18:37 (17440): Enabling shared directory for VM. 2019-06-19 21:18:37 (17440): Starting VM. (boinc_c2af959126f5124e, slot#0) 2019-06-19 21:18:48 (17440): Guest Log: BIOS: VirtualBox 5.2.28 2019-06-19 21:18:48 (17440): Guest Log: CPUID EDX: 0x178bfbff 2019-06-19 21:18:48 (17440): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032 2019-06-19 21:18:48 (17440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80 2019-06-19 21:18:48 (17440): Guest Log: BIOS: Boot from Hard Disk 0 failed 2019-06-19 21:18:48 (17440): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003 2019-06-19 21:18:48 (17440): Guest Log: BIOS: Booting from CD-ROM... 2019-06-19 21:18:48 (17440): Successfully started VM. (PID = '13592') 2019-06-19 21:18:48 (17440): Reporting VM Process ID to BOINC. 2019-06-19 21:18:53 (17440): Guest Log: BIOS: KBD: unsupported int 16h function 03 2019-06-19 21:18:53 (17440): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 2019-06-19 21:18:53 (17440): VM state change detected. (old = 'poweroff', new = 'running') 2019-06-19 21:19:03 (17440): Preference change detected 2019-06-19 21:19:03 (17440): Setting CPU throttle for VM. (100%) 2019-06-19 21:19:03 (17440): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds)) 2019-06-19 21:19:24 (17440): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds 2019-06-19 21:19:24 (17440): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000) 2019-06-19 21:19:29 (17440): Guest Log: net.ipv4.ip_forward = 1 2019-06-19 21:19:29 (17440): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory 2019-06-19 21:19:29 (17440): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory 2019-06-19 21:19:29 (17440): Guest Log: sysctl: "cannot stat %s" is an unknown key 2019-06-19 21:19:29 (17440): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory 2019-06-19 21:19:29 (17440): Guest Log: Segmentation fault 2019-06-19 21:19:29 (17440): Guest Log: automount ... 2019-06-19 21:19:29 (17440): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string 2019-06-19 21:19:29 (17440): Guest Log: automount over. 2019-06-19 21:19:29 (17440): Guest Log: [1;32mSetting hostname to [1;35mboot2docker[0;39m [1;32mDone.[0;39m 2019-06-19 21:19:29 (17440): Guest Log: Wed Jun 19 21:19:22 UTC 2019 dhcp ------------------------------- 2019-06-19 21:19:34 (17440): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains: 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1114) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00 (1354) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXCPU:00 (1355) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXCPU:01 (1356) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXCPU:02 (1357) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXCPU:03 (1358) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00 (1359) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0 (1360) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0/event0 (1361) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00 (1362) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1363) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1364) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00 (1365) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1366) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1367) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1368) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1369) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1370) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input7 (1371) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input7/event6 (1372) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1373) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1374) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1375) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1376) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1377) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1378) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1379) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1380) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1381) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1382) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1383) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1384) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1385) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1386) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1387) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1388) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1389) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1390) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1391) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1392) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1393) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1394) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1395) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1396) 2019-06-19 21:19:34 (17440): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1397) 2019-06-19 21:19:34 (17440): Guest Log: Wed Jun 19 21:19:28 UTC 2019 dhcp ------------------------------- 2019-06-19 21:19:34 (17440): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log 2019-06-19 21:19:34 (17440): Guest Log: 00:00:00.000233 main Log opened 2019-06-19T21:19:29.128291000Z 2019-06-19 21:19:34 (17440): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log 2019-06-19 21:19:34 (17440): Guest Log: 00:00:00.000233 main Log opened 2019-06-19T21:19:29.128291000Z 2019-06-19 21:19:34 (17440): Guest Log: 00:00:00.009594 main OS Product: Linux 2019-06-19 21:19:34 (17440): Guest Log: 00:00:00.009594 main OS Product: Linux 2019-06-19 21:19:34 (17440): Guest Log: 00:00:00.012692 main OS Release: 4.1.19-boot2docker 2019-06-19 21:19:34 (17440): Guest Log: 00:00:00.012789 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016 2019-06-19 21:19:34 (17440): Guest Log: 00:00:00.012879 main Executable: /sbin/VBoxService 2019-06-19 21:19:34 (17440): Guest Log: 00:00:00.012882 main Process ID: 887 2019-06-19 21:19:34 (17440): Guest Log: 00:00:00.012884 main Package type: LINUX_64BITS_GENERIC 2019-06-19 21:19:34 (17440): Guest Log: 00:00:00.012692 main OS Release: 4.1.19-boot2docker 2019-06-19 21:19:34 (17440): Guest Log: 00:00:00.012789 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016 2019-06-19 21:19:34 (17440): Guest Log: 00:00:00.012879 main Executable: /sbin/VBoxService 2019-06-19 21:19:34 (17440): Guest Log: 00:00:00.024123 main 5.0.16 r105871 started. Verbose level = 0 2019-06-19 21:19:34 (17440): Guest Log: 00:00:00.012882 main Process ID: 887 2019-06-19 21:19:34 (17440): Guest Log: 00:00:00.012884 main Package type: LINUX_64BITS_GENERIC 2019-06-19 21:19:34 (17440): Guest Log: 00:00:00.030864 vminfo rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory 2019-06-19 21:19:34 (17440): Guest Log: 00:00:00.030973 vminfo Error: Unable to connect to system D-Bus (1/3): D-Bus not installed 2019-06-19 21:19:34 (17440): Guest Log: 00:00:00.024123 main 5.0.16 r105871 started. Verbose level = 0 2019-06-19 21:19:34 (17440): Guest Log: Mounting BOINC shared/... 2019-06-19 21:19:34 (17440): Guest Log: ------------------- 2019-06-19 21:19:34 (17440): Guest Log: Thu Jun 20 04:19:31 UTC 2019 2019-06-19 21:19:39 (17440): Guest Log: 00:00:05.035340 vminfo Error: Unable to connect to system D-Bus (2/3): D-Bus not installed 2019-06-19 21:19:39 (17440): Guest Log: Thu Jun 20 04:19:41 UTC 2019 2019-06-19 21:19:39 (17440): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 2019-06-19 21:19:39 (17440): Guest Log: link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00 2019-06-19 21:19:39 (17440): Guest Log: inet 127.0.0.1/8 scope host lo 2019-06-19 21:19:39 (17440): Guest Log: valid_lft forever preferred_lft forever 2019-06-19 21:19:39 (17440): Guest Log: inet6 ::1/128 scope host 2019-06-19 21:19:39 (17440): Guest Log: valid_lft forever preferred_lft forever 2019-06-19 21:19:39 (17440): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 2019-06-19 21:19:39 (17440): Guest Log: link/ether 86:96:ff:be:30:f4 brd ff:ff:ff:ff:ff:ff 2019-06-19 21:19:39 (17440): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000 2019-06-19 21:19:39 (17440): Guest Log: link/ether 08:00:27:07:02:f8 brd ff:ff:ff:ff:ff:ff 2019-06-19 21:19:39 (17440): Guest Log: inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0 2019-06-19 21:19:39 (17440): Guest Log: valid_lft forever preferred_lft forever 2019-06-19 21:19:39 (17440): Guest Log: inet6 fe80::a00:27ff:fe07:2f8/64 scope link 2019-06-19 21:19:39 (17440): Guest Log: valid_lft forever preferred_lft forever 2019-06-19 21:19:39 (17440): Guest Log: ------------------- 2019-06-19 21:19:39 (17440): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence 2019-06-19 21:19:39 (17440): Guest Log: Waiting for Docker daemon to start... 2019-06-19 21:19:39 (17440): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE 2019-06-19 21:19:39 (17440): Guest Log: Running boinc_app... 2019-06-19 21:19:39 (17440): Guest Log: Importing Docker image from BOINC... 2019-06-19 21:19:44 (17440): Guest Log: 00:00:10.036479 vminfo Error: Unable to connect to system D-Bus (3/3): D-Bus not installed 2019-06-19 21:22:16 (17440): Guest Log: Prerun diagnostics... 2019-06-19 21:22:16 (17440): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE 2019-06-19 21:22:16 (17440): Guest Log: carlosred/mpi-lammps latest 010869c6d9b8 11 months ago 1.473 GB 2019-06-19 21:22:16 (17440): Guest Log: CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES 2019-06-19 21:22:16 (17440): Guest Log: 1.4G /var/lib/docker 2019-06-19 21:22:16 (17440): Guest Log: total used free shared buff/cache available 2019-06-19 21:22:16 (17440): Guest Log: Mem: 6204 67 4444 1634 1692 4447 2019-06-19 21:22:16 (17440): Guest Log: Swap: 1500 0 1500 2019-06-19 21:22:16 (17440): Guest Log: Prerun commands... 2019-06-19 21:22:16 (17440): Guest Log: Running... 2019-06-19 21:22:16 (17440): Guest Log: % Total % Received % Xferd Average Speed Time Time Time Current 2019-06-19 21:22:16 (17440): Guest Log: Dload Upload Total Spent Left Speed 2019-06-19 21:22:22 (17440): Guest Log: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 2019-06-19 21:22:22 (17440): Guest Log: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 2019-06-19 21:22:22 (17440): Guest Log: 66 762k 66 504k 0 0 456k 0 0:00:01 0:00:01 --:--:-- 456k 2019-06-19 21:22:22 (17440): Guest Log: 100 762k 100 762k 0 0 587k 0 0:00:01 0:00:01 --:--:-- 587k 2019-06-19 21:22:22 (17440): Guest Log: % Total % Received % Xferd Average Speed Time Time Time Current 2019-06-19 21:22:22 (17440): Guest Log: Dload Upload Total Spent Left Speed 2019-06-19 21:22:22 (17440): Guest Log: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 2019-06-19 21:22:22 (17440): Guest Log: 100 1272 100 1272 0 0 4918 0 --:--:-- --:--:-- --:--:-- 4930 2019-06-19 21:22:22 (17440): Guest Log: Postrun commands... 2019-06-19 21:22:22 (17440): Guest Log: boinc_app exited (0) 2019-06-19 21:22:22 (17440): Guest Log: Saving results... 2019-06-19 21:22:22 (17440): Guest Log: lammps_test.txt 2019-06-19 21:22:22 (17440): VM Completion File Detected. 2019-06-19 21:22:22 (17440): Powering off VM. 2019-06-19 21:22:23 (17440): Successfully stopped VM. 2019-06-19 21:22:28 (17440): Deregistering VM. (boinc_c2af959126f5124e, slot#0) 2019-06-19 21:22:28 (17440): Removing virtual disk drive(s) from VM. 2019-06-19 21:22:28 (17440): Removing network bandwidth throttle group from VM. 2019-06-19 21:22:28 (17440): Removing storage controller(s) from VM. 2019-06-19 21:22:28 (17440): Removing VM from VirtualBox. 21:22:34 (17440): called boinc_finish(0) </stderr_txt> ]]>