Task 226185
Name | boinc2docker_13382_1556824600.242307_7 |
Workunit | 68132 |
Created | 16 May 2019, 22:21:01 UTC |
Sent | 16 May 2019, 22:21:37 UTC |
Report deadline | 23 May 2019, 22:21:37 UTC |
Received | 17 May 2019, 6:56:15 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 627 |
Run time | 5 min 28 sec |
CPU time | 4 min 13 sec |
Validate state | Valid |
Credit | 14.95 |
Device peak FLOPS | 7.45 GFLOPS |
Application version | boinc2docker v1.07 (vbox64_mt) x86_64-pc-linux-gnu |
Peak working set size | 92.70 MB |
Peak swap size | 104.32 MB |
Peak disk usage | 237.99 MB |
Stderr output
<core_client_version>7.14.2</core_client_version> <![CDATA[ <stderr_txt> 2019-05-17 08:50:29 (17008): vboxwrapper (7.9.26200): starting 2019-05-17 08:50:29 (17008): Feature: Checkpoint interval offset (417 seconds) 2019-05-17 08:50:29 (17008): Detected: VirtualBox COM Interface (Version: 5.2.26) 2019-05-17 08:50:29 (17008): Detected: Minimum checkpoint interval (600.000000 seconds) 2019-05-17 08:50:29 (17008): Create VM. (boinc_5e652cd1d69f2410, slot#0) 2019-05-17 08:50:29 (17008): Updating drive controller type and model for desired configuration. 2019-05-17 08:50:29 (17008): Setting Memory Size for VM. (3288MB) 2019-05-17 08:50:29 (17008): Setting CPU Count for VM. (2) 2019-05-17 08:50:30 (17008): Setting Chipset Options for VM. 2019-05-17 08:50:30 (17008): Setting Boot Options for VM. 2019-05-17 08:50:30 (17008): Enabling VM Network Access. 2019-05-17 08:50:30 (17008): Setting Network Configuration for NAT. 2019-05-17 08:50:30 (17008): Disabling USB Support for VM. 2019-05-17 08:50:30 (17008): Disabling COM Port Support for VM. 2019-05-17 08:50:30 (17008): Disabling LPT Port Support for VM. 2019-05-17 08:50:30 (17008): Disabling Audio Support for VM. 2019-05-17 08:50:30 (17008): Disabling Clipboard Support for VM. 2019-05-17 08:50:30 (17008): Disabling Drag and Drop Support for VM. 2019-05-17 08:50:30 (17008): Adding storage controller(s) to VM. 2019-05-17 08:50:30 (17008): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso) 2019-05-17 08:50:30 (17008): Adding VirtualBox Guest Additions to VM. 2019-05-17 08:50:30 (17008): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB) 2019-05-17 08:50:30 (17008): Enabling shared directory for VM. 2019-05-17 08:50:30 (17008): Starting VM. (boinc_5e652cd1d69f2410, slot#0) 2019-05-17 08:50:39 (17008): Guest Log: BIOS: VirtualBox 5.2.26 2019-05-17 08:50:39 (17008): Guest Log: CPUID EDX: 0x178bfbff 2019-05-17 08:50:39 (17008): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032 2019-05-17 08:50:39 (17008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80 2019-05-17 08:50:39 (17008): Guest Log: BIOS: Boot from Hard Disk 0 failed 2019-05-17 08:50:39 (17008): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003 2019-05-17 08:50:39 (17008): Guest Log: BIOS: Booting from CD-ROM... 2019-05-17 08:50:39 (17008): Successfully started VM. (PID = '9888') 2019-05-17 08:50:39 (17008): Reporting VM Process ID to BOINC. 2019-05-17 08:50:44 (17008): Guest Log: BIOS: KBD: unsupported int 16h function 03 2019-05-17 08:50:44 (17008): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 2019-05-17 08:50:44 (17008): VM state change detected. (old = 'poweroff', new = 'running') 2019-05-17 08:50:49 (17008): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds 2019-05-17 08:50:49 (17008): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000) 2019-05-17 08:50:49 (17008): Guest Log: net.ipv4.ip_forward = 1 2019-05-17 08:50:49 (17008): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory 2019-05-17 08:50:49 (17008): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory 2019-05-17 08:50:49 (17008): Guest Log: sysctl: "cannot stat %s" is an unknown key 2019-05-17 08:50:49 (17008): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory 2019-05-17 08:50:49 (17008): Guest Log: Segmentation fault 2019-05-17 08:50:49 (17008): Guest Log: automount ... 2019-05-17 08:50:54 (17008): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string 2019-05-17 08:50:54 (17008): Guest Log: automount over. 2019-05-17 08:50:54 (17008): Guest Log: [1;32mSetting hostname to [1;35mboot2docker[0;39m [1;32mDone.[0;39m 2019-05-17 08:50:54 (17008): Guest Log: Fri May 17 08:50:47 UTC 2019 dhcp ------------------------------- 2019-05-17 08:50:54 (17008): Preference change detected 2019-05-17 08:50:54 (17008): Setting CPU throttle for VM. (100%) 2019-05-17 08:50:54 (17008): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 600 seconds)) 2019-05-17 08:50:59 (17008): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains: 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1090) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00 (1319) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXCPU:00 (1320) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXCPU:01 (1321) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00 (1322) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0 (1323) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0/event0 (1324) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00 (1325) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1326) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1327) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00 (1328) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1329) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1330) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1331) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1332) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1333) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6 (1334) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6/event5 (1335) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1336) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1337) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1338) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1339) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1340) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1341) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1342) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1343) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1344) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1345) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1346) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1347) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1348) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1349) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1350) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1351) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1352) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1353) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1354) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1355) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1356) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1357) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1358) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1359) 2019-05-17 08:50:59 (17008): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1360) 2019-05-17 08:50:59 (17008): Guest Log: Fri May 17 08:50:53 UTC 2019 dhcp ------------------------------- 2019-05-17 08:50:59 (17008): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log 2019-05-17 08:50:59 (17008): Guest Log: 00:00:00.000107 main Log opened 2019-05-17T08:50:53.554020000Z 2019-05-17 08:50:59 (17008): Guest Log: 00:00:00.000216 main OS Product: Linux 2019-05-17 08:50:59 (17008): Guest Log: V00:00:00.000283 main OS Release: 4.1.19-boot2docker 2019-05-17 08:50:59 (17008): Guest Log: Box00:00:00.000331 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016 2019-05-17 08:50:59 (17008): Guest Log: er00:00:00.000374 main Executable: /sbin/VBoxServicev 2019-05-17 08:50:59 (17008): Guest Log: 00:00:00.000376 main Process ID: 992 2019-05-17 08:50:59 (17008): Guest Log: 00:00:00.000377 main Package type: LINUX_64BITS_GENERIC 2019-05-17 08:50:59 (17008): Guest Log: 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release00:00:00.001558 main 5.0.16 r105871 started. Verbose level = 0 2019-05-17 08:50:59 (17008): Guest Log: og 2019-05-17 08:50:59 (17008): Guest Log: 00:00:00.000107 main Log opened 2019-05-17T08:50:53.554020000Z 2019-05-17 08:50:59 (17008): Guest Log: 00:00:00.000216 main OS Product: Linux 2019-05-17 08:50:59 (17008): Guest Log: 00:00:00.000283 main OS Release: 4.1.19-boot2docker 2019-05-17 08:50:59 (17008): Guest Log: 00:00:00.000331 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016 2019-05-17 08:50:59 (17008): Guest Log: 00:00:00.000374 main Executable: /sbin/VBoxService 2019-05-17 08:50:59 (17008): Guest Log: 00:00:00.016853 vminfo rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory 2019-05-17 08:50:59 (17008): Guest Log: 00:00:00.016940 vminfo Error: Unable to connect to system D-Bus (1/3): D-Bus not installed 2019-05-17 08:50:59 (17008): Guest Log: 00:00:00.000376 main Process ID: 992 2019-05-17 08:50:59 (17008): Guest Log: 00:00:00.000377 main Package type: LINUX_64BITS_GENERIC 2019-05-17 08:50:59 (17008): Guest Log: 00:00:00.001558 main 5.0.16 r105871 started. Verbose level = 0 2019-05-17 08:50:59 (17008): Guest Log: Mounting BOINC shared/... 2019-05-17 08:50:59 (17008): Guest Log: ------------------- 2019-05-17 08:50:59 (17008): Guest Log: Fri May 17 06:50:56 UTC 2019 2019-05-17 08:51:04 (17008): Guest Log: 00:00:05.019083 vminfo Error: Unable to connect to system D-Bus (2/3): D-Bus not installed 2019-05-17 08:51:04 (17008): Guest Log: Fri May 17 06:51:01 UTC 2019 2019-05-17 08:51:04 (17008): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 2019-05-17 08:51:04 (17008): Guest Log: link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00 2019-05-17 08:51:04 (17008): Guest Log: inet 127.0.0.1/8 scope host lo 2019-05-17 08:51:04 (17008): Guest Log: valid_lft forever preferred_lft forever 2019-05-17 08:51:04 (17008): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 2019-05-17 08:51:04 (17008): Guest Log: link/ether 6a:70:0c:c4:56:3e brd ff:ff:ff:ff:ff:ff 2019-05-17 08:51:04 (17008): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000 2019-05-17 08:51:04 (17008): Guest Log: link/ether 08:00:27:fa:10:c1 brd ff:ff:ff:ff:ff:ff 2019-05-17 08:51:04 (17008): Guest Log: inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0 2019-05-17 08:51:04 (17008): Guest Log: valid_lft forever preferred_lft forever 2019-05-17 08:51:04 (17008): Guest Log: ------------------- 2019-05-17 08:51:04 (17008): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence 2019-05-17 08:51:04 (17008): Guest Log: Waiting for Docker daemon to start... 2019-05-17 08:51:04 (17008): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE 2019-05-17 08:51:04 (17008): Guest Log: Running boinc_app... 2019-05-17 08:51:04 (17008): Guest Log: Importing Docker image from BOINC... 2019-05-17 08:51:10 (17008): Guest Log: 00:00:10.020709 vminfo Error: Unable to connect to system D-Bus (3/3): D-Bus not installed 2019-05-17 08:51:35 (17008): Guest Log: Prerun diagnostics... 2019-05-17 08:51:35 (17008): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE 2019-05-17 08:51:35 (17008): Guest Log: carlosred/autodock-vina latest f9dc0bf006e4 11 months ago 697 MB 2019-05-17 08:51:35 (17008): Guest Log: CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES 2019-05-17 08:51:35 (17008): Guest Log: 705.2M /var/lib/docker 2019-05-17 08:51:35 (17008): Guest Log: total used free shared buff/cache available 2019-05-17 08:51:35 (17008): Guest Log: Mem: 3219 54 2247 869 917 2249 2019-05-17 08:51:35 (17008): Guest Log: Swap: 753 0 753 2019-05-17 08:51:35 (17008): Guest Log: Prerun commands... 2019-05-17 08:51:35 (17008): Guest Log: Running... 2019-05-17 08:51:35 (17008): Guest Log: % Total % Received % Xferd Average Speed Time Time Time Current 2019-05-17 08:51:35 (17008): Guest Log: Dload Upload Total Spent Left Speed 2019-05-17 08:51:35 (17008): Guest Log: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 2019-05-17 08:51:35 (17008): Guest Log: 100 211k 100 211k 0 0 213k 0 --:--:-- --:--:-- --:--:-- 353k 2019-05-17 08:51:35 (17008): Guest Log: % Total % Received % Xferd Average Speed Time Time Time Current 2019-05-17 08:51:35 (17008): Guest Log: Dload Upload Total Spent Left Speed 2019-05-17 08:51:35 (17008): Guest Log: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 2019-05-17 08:51:35 (17008): Guest Log: 102 3878 102 3878 0 0 8912 0 --:--:-- --:--:-- --:--:-- 24858 2019-05-17 08:51:35 (17008): Guest Log: % Total % Received % Xferd Average Speed Time Time Time Current 2019-05-17 08:51:35 (17008): Guest Log: Dload Upload Total Spent Left Speed 2019-05-17 08:51:35 (17008): Guest Log: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 2019-05-17 08:51:35 (17008): Guest Log: 102 3983 102 3983 0 0 9011 0 --:--:-- --:--:-- --:--:-- 25050 2019-05-17 08:51:40 (17008): Guest Log: % Total % Received % Xferd Average Speed Time Time Time Current 2019-05-17 08:51:40 (17008): Guest Log: Dload Upload Total Spent Left Speed 2019-05-17 08:51:40 (17008): Guest Log: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 2019-05-17 08:51:40 (17008): Guest Log: 0 171k 0 1319 0 0 2972 0 0:00:59 --:--:-- 0:00:59 8455 2019-05-17 08:51:40 (17008): Guest Log: 100 171k 100 171k 0 0 197k 0 --:--:-- --:--:-- --:--:-- 295k 2019-05-17 08:51:40 (17008): Guest Log: % Total % Received % Xferd Average Speed Time Time Time Current 2019-05-17 08:51:40 (17008): Guest Log: Dload Upload Total Spent Left Speed 2019-05-17 08:51:40 (17008): Guest Log: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 2019-05-17 08:51:40 (17008): Guest Log: 102 3781 102 3781 0 0 11866 0 --:--:-- --:--:-- --:--:-- 24237 2019-05-17 08:51:40 (17008): Guest Log: % Total % Received % Xferd Average Speed Time Time Time Current 2019-05-17 08:51:40 (17008): Guest Log: Dload Upload Total Spent Left Speed 2019-05-17 08:51:40 (17008): Guest Log: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 2019-05-17 08:51:40 (17008): Guest Log: 102 3781 102 3781 0 0 7177 0 --:--:-- --:--:-- --:--:-- 24237 2019-05-17 08:51:40 (17008): Guest Log: % Total % Received % Xferd Average Speed Time Time Time Current 2019-05-17 08:51:40 (17008): Guest Log: Dload Upload Total Spent Left Speed 2019-05-17 08:51:40 (17008): Guest Log: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 2019-05-17 08:51:40 (17008): Guest Log: 157 157 157 157 0 0 502 0 --:--:-- --:--:-- --:--:-- 1012 2019-05-17 08:51:40 (17008): Guest Log: ################################################################# 2019-05-17 08:51:40 (17008): Guest Log: # If you used AutoDock Vina in your work, please cite: # 2019-05-17 08:51:40 (17008): Guest Log: # # 2019-05-17 08:51:40 (17008): Guest Log: # O. Trott, A. J. Olson, # 2019-05-17 08:51:40 (17008): Guest Log: # AutoDock Vina: improving the speed and accuracy of docking # 2019-05-17 08:51:40 (17008): Guest Log: # with a new scoring function, efficient optimization and # 2019-05-17 08:51:40 (17008): Guest Log: # multithreading, Journal of Computational Chemistry 31 (2010) # 2019-05-17 08:51:40 (17008): Guest Log: # 455-461 # 2019-05-17 08:51:40 (17008): Guest Log: # # 2019-05-17 08:51:40 (17008): Guest Log: # DOI 10.1002/jcc.21334 # 2019-05-17 08:51:40 (17008): Guest Log: # # 2019-05-17 08:51:40 (17008): Guest Log: # Please see http://vina.scripps.edu for more information. # 2019-05-17 08:51:40 (17008): Guest Log: ################################################################# 2019-05-17 08:51:40 (17008): Guest Log: Reading input ... done. 2019-05-17 08:51:40 (17008): Guest Log: Setting up the scoring function ... done. 2019-05-17 08:51:40 (17008): Guest Log: Analyzing the binding site ... done. 2019-05-17 08:51:40 (17008): Guest Log: Using random seed: 676452268 2019-05-17 08:51:40 (17008): Guest Log: Performing search ... 2019-05-17 08:51:40 (17008): Guest Log: 0% 10 20 30 40 50 60 70 80 90 100% 2019-05-17 08:51:40 (17008): Guest Log: |----|----|----|----|----|----|----|----|----|----| 2019-05-17 08:55:45 (17008): Guest Log: *************************************************** 2019-05-17 08:55:45 (17008): Guest Log: done. 2019-05-17 08:55:45 (17008): Guest Log: Refining results ... done. 2019-05-17 08:55:45 (17008): Guest Log: mode | affinity | dist from best mode 2019-05-17 08:55:45 (17008): Guest Log: | (kcal/mol) | rmsd l.b.| rmsd u.b. 2019-05-17 08:55:45 (17008): Guest Log: -----+------------+----------+---------- 2019-05-17 08:55:45 (17008): Guest Log: 1 -12.9 0.000 0.000 2019-05-17 08:55:45 (17008): Guest Log: 2 -11.0 3.350 12.214 2019-05-17 08:55:45 (17008): Guest Log: 3 -10.8 2.543 12.533 2019-05-17 08:55:45 (17008): Guest Log: 4 -10.7 3.113 12.431 2019-05-17 08:55:45 (17008): Guest Log: 5 -10.4 2.972 13.857 2019-05-17 08:55:45 (17008): Guest Log: Writing output ... done. 2019-05-17 08:55:45 (17008): Guest Log: Postrun commands... 2019-05-17 08:55:45 (17008): Guest Log: boinc_app exited (0) 2019-05-17 08:55:45 (17008): Guest Log: Saving results... 2019-05-17 08:55:45 (17008): Guest Log: 1OPK.pdbqt 2019-05-17 08:55:45 (17008): Guest Log: ZINC00000567.pdbqt 2019-05-17 08:55:45 (17008): Guest Log: all.pdbqt 2019-05-17 08:55:45 (17008): Guest Log: ligand.pdbqt 2019-05-17 08:55:45 (17008): Guest Log: ligand_experiment.pdbqt 2019-05-17 08:55:45 (17008): Guest Log: protein.pdbqt 2019-05-17 08:55:45 (17008): VM Completion File Detected. 2019-05-17 08:55:45 (17008): Powering off VM. 2019-05-17 08:55:46 (17008): Successfully stopped VM. 2019-05-17 08:55:51 (17008): Deregistering VM. (boinc_5e652cd1d69f2410, slot#0) 2019-05-17 08:55:51 (17008): Removing virtual disk drive(s) from VM. 2019-05-17 08:55:51 (17008): Removing network bandwidth throttle group from VM. 2019-05-17 08:55:51 (17008): Removing storage controller(s) from VM. 2019-05-17 08:55:52 (17008): Removing VM from VirtualBox. 08:55:57 (17008): called boinc_finish(0) </stderr_txt> ]]>