Task 216953

Name boinc2docker_10414_1556847398.768555_1
Workunit 99395
Created 3 May 2019, 1:36:43 UTC
Sent 3 May 2019, 23:53:37 UTC
Report deadline 10 May 2019, 23:53:37 UTC
Received 10 May 2019, 16:29:36 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 967
Run time 1 hours 33 min 49 sec
CPU time 1 hours 23 min 44 sec
Validate state Valid
Credit 16.00
Device peak FLOPS 5.91 GFLOPS
Application version boinc2docker v1.07 (vbox64_mt)
x86_64-apple-darwin
Peak working set size 2,714.52 MB
Peak swap size 11,109.38 MB
Peak disk usage 340.75 MB

Stderr output

<core_client_version>7.14.2</core_client_version>
<![CDATA[
<stderr_txt>
2019-05-05 22:14:36 (58506): vboxwrapper (7.7.26199): starting
2019-05-05 22:14:36 (58506): Feature: Checkpoint interval offset (274 seconds)
2019-05-05 22:14:36 (58506): Detected: VirtualBox VboxManage Interface (Version: 5.2.16)
2019-05-05 22:14:36 (58506): Detected: Sandbox Configuration Enabled
2019-05-05 22:14:36 (58506): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-05-05 22:14:36 (58506): Create VM. (boinc_4fa08999c403daf6, slot#0)
2019-05-05 22:14:36 (58506): Updating drive controller type and model for desired configuration.
2019-05-05 22:14:36 (58506): Setting Memory Size for VM. (3534MB)
2019-05-05 22:14:36 (58506): Setting CPU Count for VM. (2)
2019-05-05 22:14:36 (58506): Setting Chipset Options for VM.
2019-05-05 22:14:36 (58506): Setting Boot Options for VM.
2019-05-05 22:14:37 (58506): Setting Network Configuration for NAT.
2019-05-05 22:14:37 (58506): Enabling VM Network Access.
2019-05-05 22:14:37 (58506): Disabling USB Support for VM.
2019-05-05 22:14:37 (58506): Disabling COM Port Support for VM.
2019-05-05 22:14:37 (58506): Disabling Audio Support for VM.
2019-05-05 22:14:37 (58506): Disabling Clipboard Support for VM.
2019-05-05 22:14:37 (58506): Disabling Drag and Drop Support for VM.
2019-05-05 22:14:37 (58506): Adding storage controller(s) to VM.
2019-05-05 22:14:37 (58506): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2019-05-05 22:14:37 (58506): Adding VirtualBox Guest Additions to VM.
2019-05-05 22:14:37 (58506): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-05-05 22:14:37 (58506): Enabling shared directory for VM.
2019-05-05 22:14:38 (58506): Starting VM. (boinc_4fa08999c403daf6, slot#0)
2019-05-05 22:14:39 (58506): Successfully started VM. (PID = '58561')
2019-05-05 22:14:39 (58506): Reporting VM Process ID to BOINC.
2019-05-05 22:14:39 (58506): Guest Log: BIOS: VirtualBox 5.2.16
2019-05-05 22:14:39 (58506): Guest Log: CPUID EDX: 0x178bfbff
2019-05-05 22:14:39 (58506): VM state change detected. (old = 'poweroff', new = 'running')
2019-05-05 22:14:39 (58506): Preference change detected
2019-05-05 22:14:39 (58506): Setting CPU throttle for VM. (60%)
2019-05-05 22:14:39 (58506): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2019-05-05 22:14:41 (58506): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-05-05 22:14:41 (58506): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2019-05-05 22:14:41 (58506): Guest Log: BIOS: Booting from CD-ROM...
2019-05-05 22:14:44 (58506): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-05-05 22:15:17 (58506): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-05-05 22:15:17 (58506): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-05-05 22:15:18 (58506): Guest Log: net.ipv4.ip_forward = 1
2019-05-05 22:15:18 (58506): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2019-05-05 22:15:18 (58506): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-05-05 22:15:18 (58506): Guest Log: sysctl: "cannot stat %s" is an unknown key
2019-05-05 22:15:18 (58506): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-05-05 22:15:18 (58506): Guest Log: Segmentation fault
2019-05-05 22:15:21 (58506): Guest Log: automount ...
2019-05-05 22:15:21 (58506): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2019-05-05 22:15:23 (58506): Guest Log: automount over.
2019-05-05 22:15:25 (58506): Guest Log: Setting hostname to boot2docker Done.
2019-05-05 22:15:25 (58506): Guest Log: Sun May  5 22:15:22 UTC 2019 dhcp -------------------------------
2019-05-05 22:15:32 (58506): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2019-05-05 22:15:32 (58506): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1354)
2019-05-05 22:15:34 (58506): Guest Log: Sun May  5 22:15:29 UTC 2019 dhcp -------------------------------
2019-05-05 22:15:34 (58506): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-05-05 22:15:34 (58506): Guest Log: 00:00:00.000806 main     Log opened 2019-05-05T22:15:31.199185000Z
2019-05-05 22:15:34 (58506): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-05-05 22:15:34 (58506): Guest Log: 00:00:00.000806 main     Log opened 2019-05-05T22:15:31.199185000Z
2019-05-05 22:15:34 (58506): Guest Log: 00:00:00.011873 main     OS Product: Linux
2019-05-05 22:15:34 (58506): Guest Log: 00:00:00.012018 main     OS Release: 4.1.19-boot2docker
2019-05-05 22:15:34 (58506): Guest Log: 00:00:00.012109 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-05-05 22:15:34 (58506): Guest Log: 00:00:00.012200 main     Executable: /sbin/VBoxService
2019-05-05 22:15:34 (58506): Guest Log: 00:00:00.012202 main     Process ID: 816
2019-05-05 22:15:34 (58506): Guest Log: 00:00:00.012203 main     Package type: LINUX_64BITS_GENERIC
2019-05-05 22:15:34 (58506): Guest Log: 00:00:00.011873 main     OS Product: Linux
2019-05-05 22:15:34 (58506): Guest Log: 00:00:00.012018 main     OS Release: 400:00:00.019864 main     5.0.16 r105871 started. Verbose level = 0
2019-05-05 22:15:34 (58506): Guest Log: .1.19-boot2docker
2019-05-05 22:15:34 (58506): Guest Log: 00:00:00.012109 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-05-05 22:15:34 (58506): Guest Log: 00:00:00.012200 main     Executable: /sbin/VBoxService
2019-05-05 22:15:34 (58506): Guest Log: 00:00:00.012202 main     Process ID: 816
2019-05-05 22:15:34 (58506): Guest Log: 00:00:00.012203 main     Package type: LINUX_64BITS_GENERIC
2019-05-05 22:15:34 (58506): Guest Log: 00:00:00.153128 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2019-05-05 22:15:34 (58506): Guest Log: 00:00:00.019864 main     5.0.16 r105871 started. Verbose level = 0
2019-05-05 22:15:34 (58506): Guest Log: 00:00:00.172061 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2019-05-05 22:15:34 (58506): Guest Log: Mounting BOINC shared/...
2019-05-05 22:15:36 (58506): Guest Log: -------------------
2019-05-05 22:15:36 (58506): Guest Log: Sun May  5 20:15:35 UTC 2019
2019-05-05 22:15:39 (58506): Guest Log: 00:00:05.185166 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2019-05-05 22:15:43 (58506): Guest Log: Sun May  5 20:15:40 UTC 2019
2019-05-05 22:15:43 (58506): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2019-05-05 22:15:43 (58506): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2019-05-05 22:15:43 (58506): Guest Log:     inet 127.0.0.1/8 scope host lo
2019-05-05 22:15:43 (58506): Guest Log:        valid_lft forever preferred_lft forever
2019-05-05 22:15:43 (58506): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2019-05-05 22:15:43 (58506): Guest Log:     link/ether 1a:44:c9:83:af:b6 brd ff:ff:ff:ff:ff:ff
2019-05-05 22:15:43 (58506): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2019-05-05 22:15:43 (58506): Guest Log:     link/ether 08:00:27:9e:5f:81 brd ff:ff:ff:ff:ff:ff
2019-05-05 22:15:43 (58506): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2019-05-05 22:15:43 (58506): Guest Log:        valid_lft forever preferred_lft forever
2019-05-05 22:15:43 (58506): Guest Log: -------------------
2019-05-05 22:15:43 (58506): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2019-05-05 22:15:43 (58506): Guest Log: Waiting for Docker daemon to start...
2019-05-05 22:15:43 (58506): Guest Log: 00:00:10.189633 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2019-05-05 22:15:46 (58506): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2019-05-05 22:15:46 (58506): Guest Log: Running boinc_app...
2019-05-05 22:15:46 (58506): Guest Log: Importing Docker image from BOINC...
2019-05-05 22:17:07 (58506): Guest Log: Prerun diagnostics...
2019-05-05 22:17:07 (58506): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2019-05-05 22:17:07 (58506): Guest Log: carlosred/bowtie    built               4beacb78841d        10 months ago       758.7 MB
2019-05-05 22:17:07 (58506): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2019-05-05 22:17:07 (58506): Guest Log: 753.8M	/var/lib/docker
2019-05-05 22:17:08 (58506): Guest Log:               total        used        free      shared  buff/cache   available
2019-05-05 22:17:08 (58506): Guest Log: Mem:           3461          48        2455         917         957        2455
2019-05-05 22:17:08 (58506): Guest Log: Swap:           815           0         815
2019-05-05 22:17:08 (58506): Guest Log: Prerun commands...
2019-05-05 22:17:08 (58506): Guest Log: Running... 
2019-05-05 22:17:09 (58506): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
2019-05-05 22:17:09 (58506): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed
2019-05-05 22:49:49 (58506): Powering off VM.
2019-05-05 22:49:50 (58506): Successfully stopped VM.
2019-05-05 22:49:54 (67492): vboxwrapper (7.7.26199): starting
2019-05-05 22:49:55 (67492): Feature: Checkpoint interval offset (316 seconds)
2019-05-05 22:49:55 (67492): Detected: VirtualBox VboxManage Interface (Version: 5.2.16)
2019-05-05 22:49:55 (67492): Detected: Sandbox Configuration Enabled
2019-05-05 22:49:55 (67492): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-05-05 22:49:55 (67492): Starting VM. (boinc_4fa08999c403daf6, slot#0)
2019-05-05 22:49:56 (67492): Successfully started VM. (PID = '67509')
2019-05-05 22:49:56 (67492): Reporting VM Process ID to BOINC.
2019-05-05 22:49:57 (67492): Guest Log: BIOS: VirtualBox 5.2.16
2019-05-05 22:49:57 (67492): Guest Log: CPUID EDX: 0x178bfbff
2019-05-05 22:49:57 (67492): VM state change detected. (old = 'poweroff', new = 'running')
2019-05-05 22:49:57 (67492): Preference change detected
2019-05-05 22:49:57 (67492): Setting CPU throttle for VM. (60%)
2019-05-05 22:49:57 (67492): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2019-05-05 22:49:59 (67492): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-05-05 22:49:59 (67492): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2019-05-05 22:49:59 (67492): Guest Log: BIOS: Boot from Hard Disk 0 failed
2019-05-05 22:49:59 (67492): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2019-05-05 22:49:59 (67492): Guest Log: BIOS: Booting from CD-ROM...
2019-05-05 22:50:01 (67492): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-05-05 22:50:01 (67492): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2019-05-05 22:50:31 (67492): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-05-05 22:50:31 (67492): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-05-05 22:50:37 (67492): Guest Log: net.ipv4.ip_forward = 1
2019-05-05 22:50:37 (67492): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2019-05-05 22:50:37 (67492): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-05-05 22:50:37 (67492): Guest Log: sysctl: "cannot stat %s" is an unknown key
2019-05-05 22:50:37 (67492): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-05-05 22:50:37 (67492): Guest Log: Segmentation fault
2019-05-05 22:50:39 (67492): Guest Log: automount ...
2019-05-05 22:50:39 (67492): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2019-05-05 22:50:40 (67492): Guest Log: automount over.
2019-05-05 22:50:42 (67492): Guest Log: Setting hostname to boot2docker Done.
2019-05-05 22:50:42 (67492): Guest Log: Sun May  5 22:50:38 UTC 2019 dhcp -------------------------------
2019-05-05 22:50:51 (67492): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2019-05-05 22:50:53 (67492): Guest Log: Sun May  5 22:50:45 UTC 2019 dhcp -------------------------------
2019-05-05 22:50:55 (67492): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-05-05 22:50:55 (67492): Guest Log: 00:00:00.000761 main     Log opened 2019-05-05T22:50:46.971701000Z
2019-05-05 22:50:55 (67492): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-05-05 22:50:55 (67492): Guest Log: 00:00:00.000761 main     Log opened 2019-05-05T22:50:46.971701000Z
2019-05-05 22:50:55 (67492): Guest Log: 00:00:00.010979 main     OS Product: Linux
2019-05-05 22:50:55 (67492): Guest Log: 00:00:00.011091 main     OS Release: 4.1.19-boot2docker
2019-05-05 22:50:55 (67492): Guest Log: 00:00:00.011182 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-05-05 22:50:55 (67492): Guest Log: 00:00:00.011269 main     Executable: /sbin/VBoxService
2019-05-05 22:50:55 (67492): Guest Log: 00:00:00.011271 main     Process ID: 866
2019-05-05 22:50:55 (67492): Guest Log: 00:00:00.011272 main     Package type: LINUX_64BITS_GENERIC
2019-05-05 22:50:55 (67492): Guest Log: 000:00:00.012914 main     5.0.16 r105871 started. Verbose level = 0
2019-05-05 22:50:55 (67492): Guest Log: 0:00:00.010979 main     OS Product: Linux
2019-05-05 22:50:55 (67492): Guest Log: 00:00:00.011091 main     OS Release: 4.1.19-boot2do00:00:00.101583 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directoryc
2019-05-05 22:50:55 (67492): Guest Log: er
2019-05-05 22:50:55 (67492): Guest Log: 00:00:00.101830 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2019-05-05 22:50:55 (67492): Guest Log: 00:00:00.011182 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-05-05 22:50:55 (67492): Guest Log: 00:00:00.011269 main     Executable: /sbin/VBoxService
2019-05-05 22:50:55 (67492): Guest Log: 00:00:00.011271 main     Process ID: 866
2019-05-05 22:50:55 (67492): Guest Log: 00:00:00.011272 main     Package type: LINUX_64BITS_GENERIC
2019-05-05 22:50:55 (67492): Guest Log: 00:00:00.012914 main     5.0.16 r105871 started. Verbose level = 0
2019-05-05 22:50:56 (67492): Guest Log: Mounting BOINC shared/...
2019-05-05 22:50:57 (67492): Guest Log: -------------------
2019-05-05 22:50:57 (67492): Guest Log: Sun May  5 20:50:56 UTC 2019
2019-05-05 22:51:03 (67492): Guest Log: 00:00:05.113920 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2019-05-05 22:51:07 (67492): Guest Log: Sun May  5 20:51:01 UTC 2019
2019-05-05 22:51:07 (67492): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2019-05-05 22:51:07 (67492): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2019-05-05 22:51:07 (67492): Guest Log:     inet 127.0.0.1/8 scope host lo
2019-05-05 22:51:07 (67492): Guest Log:        valid_lft forever preferred_lft forever
2019-05-05 22:51:07 (67492): Guest Log:     inet6 ::1/128 scope host 
2019-05-05 22:51:07 (67492): Guest Log:        valid_lft forever preferred_lft forever
2019-05-05 22:51:07 (67492): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2019-05-05 22:51:07 (67492): Guest Log:     link/ether fa:f2:54:7a:c7:94 brd ff:ff:ff:ff:ff:ff
2019-05-05 22:51:07 (67492): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2019-05-05 22:51:07 (67492): Guest Log:     link/ether 08:00:27:9e:5f:81 brd ff:ff:ff:ff:ff:ff
2019-05-05 22:51:07 (67492): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2019-05-05 22:51:07 (67492): Guest Log:        valid_lft forever preferred_lft forever
2019-05-05 22:51:07 (67492): Guest Log:     inet6 fe80::a00:27ff:fe9e:5f81/64 scope link 
2019-05-05 22:51:07 (67492): Guest Log:        valid_lft forever preferred_lft forever
2019-05-05 22:51:07 (67492): Guest Log: -------------------
2019-05-05 22:51:07 (67492): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2019-05-05 22:51:07 (67492): Guest Log: Waiting for Docker daemon to start...
2019-05-05 22:51:10 (67492): Guest Log: 00:00:10.115442 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2019-05-05 22:51:12 (67492): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2019-05-05 22:51:12 (67492): Guest Log: Running boinc_app...
2019-05-05 22:51:12 (67492): Guest Log: Importing Docker image from BOINC...
2019-05-05 22:52:34 (67492): Guest Log: Prerun diagnostics...
2019-05-05 22:52:34 (67492): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2019-05-05 22:52:34 (67492): Guest Log: carlosred/bowtie    built               4beacb78841d        10 months ago       758.7 MB
2019-05-05 22:52:34 (67492): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2019-05-05 22:52:34 (67492): Guest Log: 753.8M	/var/lib/docker
2019-05-05 22:52:34 (67492): Guest Log:               total        used        free      shared  buff/cache   available
2019-05-05 22:52:35 (67492): Guest Log: Mem:           3461          53        2450         917         957        2450
2019-05-05 22:52:35 (67492): Guest Log: Swap:           815           0         815
2019-05-05 22:52:35 (67492): Guest Log: Prerun commands...
2019-05-05 22:52:35 (67492): Guest Log: Running... 
2019-05-05 22:52:36 (67492): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
2019-05-05 22:52:36 (67492): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed
2019-05-05 23:46:34 (67492): Powering off VM.
2019-05-05 23:46:35 (67492): Successfully stopped VM.
2019-05-05 23:46:40 (81554): vboxwrapper (7.7.26199): starting
2019-05-05 23:46:41 (81554): Feature: Checkpoint interval offset (382 seconds)
2019-05-05 23:46:41 (81554): Detected: VirtualBox VboxManage Interface (Version: 5.2.16)
2019-05-05 23:46:41 (81554): Detected: Sandbox Configuration Enabled
2019-05-05 23:46:41 (81554): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-05-05 23:46:41 (81554): Starting VM. (boinc_4fa08999c403daf6, slot#0)
2019-05-05 23:46:43 (81554): Successfully started VM. (PID = '81571')
2019-05-05 23:46:43 (81554): Reporting VM Process ID to BOINC.
2019-05-05 23:46:43 (81554): Guest Log: BIOS: VirtualBox 5.2.16
2019-05-05 23:46:43 (81554): Guest Log: CPUID EDX: 0x178bfbff
2019-05-05 23:46:43 (81554): VM state change detected. (old = 'poweroff', new = 'running')
2019-05-05 23:46:43 (81554): Preference change detected
2019-05-05 23:46:43 (81554): Setting CPU throttle for VM. (60%)
2019-05-05 23:46:43 (81554): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2019-05-05 23:46:45 (81554): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-05-05 23:46:45 (81554): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2019-05-05 23:46:45 (81554): Guest Log: BIOS: Boot from Hard Disk 0 failed
2019-05-05 23:46:45 (81554): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2019-05-05 23:46:45 (81554): Guest Log: BIOS: Booting from CD-ROM...
2019-05-05 23:46:48 (81554): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-05-05 23:46:48 (81554): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2019-05-05 23:47:04 (81554): VM state change detected. (old = 'running', new = 'paused')
2019-05-06 19:36:28 (81554): VM state change detected. (old = 'paused', new = 'running')
2019-05-06 19:36:39 (81554): VM state change detected. (old = 'running', new = 'paused')
2019-05-06 19:50:17 (81554): VM state change detected. (old = 'paused', new = 'running')
2019-05-06 19:50:27 (81554): VM state change detected. (old = 'running', new = 'paused')
2019-05-06 19:50:27 (81554): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-05-06 19:50:27 (81554): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-05-10 18:27:03 (81554): VM state change detected. (old = 'paused', new = 'running')
2019-05-10 18:27:08 (81554): Guest Log: net.ipv4.ip_forward = 1
2019-05-10 18:27:08 (81554): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2019-05-10 18:27:08 (81554): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-05-10 18:27:08 (81554): Guest Log: sysctl: "cannot stat %s" is an unknown key
2019-05-10 18:27:08 (81554): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-05-10 18:27:08 (81554): Guest Log: Segmentation fault
2019-05-10 18:27:10 (81554): Guest Log: automount ...
2019-05-10 18:27:10 (81554): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2019-05-10 18:27:11 (81554): Guest Log: automount over.
2019-05-10 18:27:12 (81554): Guest Log: Setting hostname to boot2docker Done.
2019-05-10 18:27:12 (81554): Guest Log: Sun May  5 23:47:31 UTC 2019 dhcp -------------------------------
2019-05-10 18:27:22 (81554): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2019-05-10 18:27:22 (81554): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1358)
2019-05-10 18:27:25 (81554): Guest Log: Sun May  5 23:47:38 UTC 2019 dhcp -------------------------------
2019-05-10 18:27:27 (81554): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-05-10 18:27:27 (81554): Guest Log: 00:00:00.000695 main     Log opened 2019-05-05T23:47:39.757207000Z
2019-05-10 18:27:27 (81554): Guest Log: 00:00:00.002430 main     OS Product: Linux
2019-05-10 18:27:27 (81554): Guest Log: VB00:00:00.002595 main     OS Release: 4.1.19-boot2docker
2019-05-10 18:27:27 (81554): Guest Log: oxS00:00:00.002688 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-05-10 18:27:27 (81554): Guest Log: erv00:00:00.002778 main     Executable: /sbin/VBoxService
2019-05-10 18:27:27 (81554): Guest Log: 00:00:00.002780 main     Process ID: 827
2019-05-10 18:27:27 (81554): Guest Log: 00:00:00.002781 main     Package type: LINUX_64BITS_GENERIC
2019-05-10 18:27:27 (81554): Guest Log: ce 5.0.1600:00:00.004588 main     5.0.16 r105871 started. Verbose level = 0
2019-05-10 18:27:27 (81554): Guest Log: r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-05-10 18:27:27 (81554): Guest Log: 00:00:00.000695 main     Log opened 2019-05-05T23:47:39.757207000Z
2019-05-10 18:27:27 (81554): Guest Log: 00:00:00.002430 main     OS Product: Linux
2019-05-10 18:27:27 (81554): Guest Log: 00:00:00.111327 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2019-05-10 18:27:27 (81554): Guest Log: 00:00:00.111749 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2019-05-10 18:27:27 (81554): Guest Log: 00:00:00.002595 main     OS Release: 4.1.19-boot2docker
2019-05-10 18:27:27 (81554): Guest Log: 00:00:00.002688 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-05-10 18:27:27 (81554): Guest Log: 00:00:00.002778 main     Executable: /sbin/VBoxService
2019-05-10 18:27:27 (81554): Guest Log: 00:00:00.002780 main     Process ID: 827
2019-05-10 18:27:27 (81554): Guest Log: 00:00:00.002781 main     Package type: LINUX_64BITS_GENERIC
2019-05-10 18:27:27 (81554): Guest Log: 00:00:00.004588 main     5.0.16 r105871 started. Verbose level = 0
2019-05-10 18:27:28 (81554): Guest Log: Mounting BOINC shared/...
2019-05-10 18:27:28 (81554): Guest Log: -------------------
2019-05-10 18:27:28 (81554): Guest Log: Fri May 10 16:27:28 UTC 2019
2019-05-10 18:27:38 (81554): Guest Log: 00:00:05.113829 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2019-05-10 18:27:41 (81554): Guest Log: Fri May 10 16:27:33 UTC 2019
2019-05-10 18:27:41 (81554): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2019-05-10 18:27:41 (81554): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2019-05-10 18:27:41 (81554): Guest Log:     inet 127.0.0.1/8 scope host lo
2019-05-10 18:27:41 (81554): Guest Log:        valid_lft forever preferred_lft forever
2019-05-10 18:27:41 (81554): Guest Log:     inet6 ::1/128 scope host 
2019-05-10 18:27:41 (81554): Guest Log:        valid_lft forever preferred_lft forever
2019-05-10 18:27:41 (81554): Guest Log:     link/ether 62:28:fa:7e:2f:17 brd ff:ff:ff:ff:ff:ff
2019-05-10 18:27:41 (81554): Guest Log:     link/ether 08:00:27:9e:5f:81 brd ff:ff:ff:ff:ff:ff
2019-05-10 18:27:41 (81554): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2019-05-10 18:27:41 (81554): Guest Log:        valid_lft forever preferred_lft forever
2019-05-10 18:27:41 (81554): Guest Log:     inet6 fe80::a00:27ff:fe9e:5f81/64 scope link 
2019-05-10 18:27:41 (81554): Guest Log:        valid_lft forever preferred_lft forever
2019-05-10 18:27:41 (81554): Guest Log: -------------------
2019-05-10 18:27:41 (81554): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2019-05-10 18:27:41 (81554): Guest Log: Waiting for Docker daemon to start...
2019-05-10 18:27:44 (81554): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2019-05-10 18:27:44 (81554): Guest Log: Running boinc_app...
2019-05-10 18:27:45 (81554): Guest Log: Importing Docker image from BOINC...
2019-05-10 18:27:45 (81554): Guest Log: 00:00:10.116277 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2019-05-10 18:29:05 (81554): Guest Log: Prerun diagnostics...
2019-05-10 18:29:05 (81554): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2019-05-10 18:29:05 (81554): Guest Log: carlosred/bowtie    built               4beacb78841d        11 months ago       758.7 MB
2019-05-10 18:29:05 (81554): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2019-05-10 18:29:06 (81554): Guest Log: 753.8M	/var/lib/docker
2019-05-10 18:29:06 (81554): Guest Log:               total        used        free      shared  buff/cache   available
2019-05-10 18:29:06 (81554): Guest Log: Mem:           3461          49        2453         917         958        2453
2019-05-10 18:29:06 (81554): Guest Log: Swap:           815           0         815
2019-05-10 18:29:06 (81554): Guest Log: Prerun commands...
2019-05-10 18:29:06 (81554): Guest Log: Running... 
2019-05-10 18:29:07 (81554): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
2019-05-10 18:29:07 (81554): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed
2019-05-10 18:29:17 (81554): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
2019-05-10 18:29:17 (81554): Guest Log:  20 14.4M   20 3021k    0     0  1454k      0  0:00:10  0:00:02  0:00:08 1455k
2019-05-10 18:29:17 (81554): Guest Log:  32 14.4M   32 4859k    0     0  1676k      0  0:00:08  0:00:02  0:00:06 1676k
2019-05-10 18:29:17 (81554): Guest Log:  76 14.4M   76 11.0M    0     0  2301k      0  0:00:06  0:00:04  0:00:02 2302k
2019-05-10 18:29:17 (81554): Guest Log:  95 14.4M   95 13.7M    0     0  2381k      0  0:00:06  0:00:05  0:00:01 2745k
2019-05-10 18:29:17 (81554): Guest Log: 100 14.4M  100 14.4M    0     0  2408k      0  0:00:06  0:00:06 --:--:-- 2896k
2019-05-10 18:29:17 (81554): Guest Log: Archive:  s_cerevisiae.ebwt.zip
2019-05-10 18:29:18 (81554): Guest Log:   inflating: s_cerevisiae.1.ebwt     
2019-05-10 18:29:18 (81554): Guest Log:   inflating: s_cerevisiae.2.ebwt     
2019-05-10 18:29:18 (81554): Guest Log:   inflating: s_cerevisiae.3.ebwt     
2019-05-10 18:29:18 (81554): Guest Log:   inflating: s_cerevisiae.4.ebwt     
2019-05-10 18:29:18 (81554): Guest Log:   inflating: s_cerevisiae.rev.1.ebwt  
2019-05-10 18:29:18 (81554): Guest Log:   inflating: s_cerevisiae.rev.2.ebwt  
2019-05-10 18:29:18 (81554): Guest Log:   inflating: make_s_cerevisiae.sh    
2019-05-10 18:29:19 (81554): Guest Log: # reads processed: 1
2019-05-10 18:29:19 (81554): Guest Log: # reads with at least one reported alignment: 1 (100.00%)
2019-05-10 18:29:19 (81554): Guest Log: # reads that failed to align: 0 (0.00%)
2019-05-10 18:29:19 (81554): Guest Log: Reported 1 alignments
2019-05-10 18:29:20 (81554): Guest Log: Postrun commands...
2019-05-10 18:29:20 (81554): Guest Log: boinc_app exited (0)
2019-05-10 18:29:20 (81554): Guest Log: Saving results...
2019-05-10 18:29:20 (81554): Guest Log: make_s_cerevisiae.sh
2019-05-10 18:29:20 (81554): Guest Log: res_bowtie.txt
2019-05-10 18:29:20 (81554): VM Completion File Detected.
2019-05-10 18:29:20 (81554): Powering off VM.
2019-05-10 18:29:20 (81554): Successfully stopped VM.
2019-05-10 18:29:20 (81554): Deregistering VM. (boinc_4fa08999c403daf6, slot#0)
2019-05-10 18:29:21 (81554): Removing network bandwidth throttle group from VM.
2019-05-10 18:29:21 (81554): Removing storage controller(s) from VM.
2019-05-10 18:29:21 (81554): Removing VM from VirtualBox.
2019-05-10 18:29:21 (81554): Removing virtual ISO 9660 disk from VirtualBox.
18:29:26 (81554): called boinc_finish(0)

</stderr_txt>
]]>