Task 194500
| Name | boinc2docker_30671_1556842442.432361_0 |
| Workunit | 88171 |
| Created | 3 May 2019, 0:14:08 UTC |
| Sent | 3 May 2019, 17:48:43 UTC |
| Report deadline | 10 May 2019, 17:48:43 UTC |
| Received | 4 May 2019, 0:20:47 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 204 |
| Run time | 1 min 6 sec |
| CPU time | |
| Validate state | Valid |
| Credit | 3.43 |
| Device peak FLOPS | 9.70 GFLOPS |
| Application version | boinc2docker v1.07 (vbox64_mt) windows_x86_64 |
| Peak working set size | 74.69 MB |
| Peak swap size | 99.09 MB |
| Peak disk usage | 259.05 MB |
Stderr output
<core_client_version>7.6.22</core_client_version>
<![CDATA[
<stderr_txt>
2019-05-04 02:19:13 (31820): vboxwrapper (7.9.26200): starting
2019-05-04 02:19:14 (31820): Feature: Checkpoint interval offset (103 seconds)
2019-05-04 02:19:14 (31820): Detected: VirtualBox VboxManage Interface (Version: 6.0.4)
2019-05-04 02:19:14 (31820): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-05-04 02:19:14 (31820): Create VM. (boinc_73211f25e856455f, slot#2)
2019-05-04 02:19:14 (31820): Updating drive controller type and model for desired configuration.
2019-05-04 02:19:15 (31820): Setting Memory Size for VM. (2697MB)
2019-05-04 02:19:15 (31820): Setting CPU Count for VM. (4)
2019-05-04 02:19:16 (31820): Setting Chipset Options for VM.
2019-05-04 02:19:16 (31820): Setting Boot Options for VM.
2019-05-04 02:19:16 (31820): Setting Network Configuration for NAT.
2019-05-04 02:19:17 (31820): Enabling VM Network Access.
2019-05-04 02:19:17 (31820): Disabling USB Support for VM.
2019-05-04 02:19:17 (31820): Disabling COM Port Support for VM.
2019-05-04 02:19:18 (31820): Disabling LPT Port Support for VM.
2019-05-04 02:19:18 (31820): Disabling Audio Support for VM.
2019-05-04 02:19:18 (31820): Disabling Clipboard Support for VM.
2019-05-04 02:19:18 (31820): Disabling Drag and Drop Support for VM.
2019-05-04 02:19:19 (31820): Adding storage controller(s) to VM.
2019-05-04 02:19:19 (31820): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2019-05-04 02:19:19 (31820): Adding VirtualBox Guest Additions to VM.
2019-05-04 02:19:20 (31820): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-05-04 02:19:20 (31820): Enabling shared directory for VM.
2019-05-04 02:19:20 (31820): Starting VM using VboxManage interface. (boinc_73211f25e856455f, slot#2)
2019-05-04 02:19:23 (31820): Successfully started VM. (PID = '32416')
2019-05-04 02:19:23 (31820): Reporting VM Process ID to BOINC.
2019-05-04 02:19:29 (31820): Guest Log: BIOS: VirtualBox 6.0.4
2019-05-04 02:19:29 (31820): Guest Log: CPUID EDX: 0x178bfbff
2019-05-04 02:19:29 (31820): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-05-04 02:19:29 (31820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2019-05-04 02:19:29 (31820): Guest Log: BIOS: Boot from Hard Disk 0 failed
2019-05-04 02:19:29 (31820): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2019-05-04 02:19:29 (31820): Guest Log: BIOS: Booting from CD-ROM...
2019-05-04 02:19:29 (31820): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-05-04 02:19:29 (31820): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000
2019-05-04 02:19:29 (31820): VM state change detected. (old = 'poweroff', new = 'running')
2019-05-04 02:19:39 (31820): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-05-04 02:19:39 (31820): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-05-04 02:19:39 (31820): Guest Log: net.ipv4.ip_forward = 1
2019-05-04 02:19:39 (31820): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2019-05-04 02:19:39 (31820): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-05-04 02:19:39 (31820): Guest Log: sysctl: "cannot stat %s" is an unknown key
2019-05-04 02:19:39 (31820): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-05-04 02:19:39 (31820): Guest Log: Segmentation fault
2019-05-04 02:19:39 (31820): Guest Log: automount ...
2019-05-04 02:19:39 (31820): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2019-05-04 02:19:39 (31820): Guest Log: automount over.
2019-05-04 02:19:39 (31820): Guest Log: [1;32mSetting hostname to [1;35mboot2docker[0;39m [1;32mDone.[0;39m
2019-05-04 02:19:39 (31820): Guest Log: Sat May 4 02:19:33 UTC 2019 dhcp -------------------------------
2019-05-04 02:19:39 (31820): Preference change detected
2019-05-04 02:19:39 (31820): Setting CPU throttle for VM. (100%)
2019-05-04 02:19:39 (31820): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2019-05-04 02:19:45 (31820): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1107)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00 (1345)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXCPU:00 (1346)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXCPU:01 (1347)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXCPU:02 (1348)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXCPU:03 (1349)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00 (1350)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0 (1351)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0/event0 (1352)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00 (1353)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1354)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1355)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00 (1356)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1357)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1358)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1359)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1360)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1361)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input7 (1362)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input7/event6 (1363)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1364)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1365)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1366)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1367)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1368)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1369)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1370)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1371)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1372)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1373)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1374)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1375)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1376)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1377)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1378)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1379)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1380)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1381)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1382)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1383)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1384)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1385)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1386)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1387)
2019-05-04 02:19:45 (31820): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1388)
2019-05-04 02:19:45 (31820): Guest Log: Sat May 4 02:19:39 UTC 2019 dhcp -------------------------------
2019-05-04 02:19:45 (31820): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log
2019-05-04 02:19:45 (31820): Guest Log: 00:00:00.000089 main Log opened 2019-05-04T02:19:39.548114000Z
2019-05-04 02:19:45 (31820): Guest Log: 00:00:00.000170 main OS Product: Linux
2019-05-04 02:19:45 (31820): Guest Log: 00:00:00.000196 main OS Release: 4.1.19-boot2docker
2019-05-04 02:19:45 (31820): Guest Log: 00:00:00.000233 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-05-04 02:19:45 (31820): Guest Log: VBox00:00:00.000288 main Executable: /sbin/VBoxService
2019-05-04 02:19:45 (31820): Guest Log: 00:00:00.000289 main Process ID: 864
2019-05-04 02:19:45 (31820): Guest Log: 00:00:00.000290 main Package type: LINUX_64BITS_GENERICe
2019-05-04 02:19:45 (31820): Guest Log: rvice 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log
2019-05-04 02:19:45 (31820): Guest Log: 00:00:00.001077 main 5.0.16 r105871 started. Verbose level = 0
2019-05-04 02:19:45 (31820): Guest Log: 00:00:00.000089 main Log opened 2019-05-04T02:19:39.548114000Z
2019-05-04 02:19:45 (31820): Guest Log: 00:00:00.000170 mai00:00:00.004586 vminfo rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2019-05-04 02:19:45 (31820): Guest Log: 00:00:00.004637 vminfo Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2019-05-04 02:19:45 (31820): Guest Log: S Product: Linux
2019-05-04 02:19:45 (31820): Guest Log: 00:00:00.000196 main OS Release: 4.1.19-boot2docker
2019-05-04 02:19:45 (31820): Guest Log: 00:00:00.000233 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-05-04 02:19:45 (31820): Guest Log: 00:00:00.000288 main Executable: /sbin/VBoxService
2019-05-04 02:19:45 (31820): Guest Log: 00:00:00.000289 main Process ID: 864
2019-05-04 02:19:45 (31820): Guest Log: 00:00:00.000290 main Package type: LINUX_64BITS_GENERIC
2019-05-04 02:19:45 (31820): Guest Log: 00:00:00.001077 main 5.0.16 r105871 started. Verbose level = 0
2019-05-04 02:19:45 (31820): Guest Log: Mounting BOINC shared/...
2019-05-04 02:19:45 (31820): Guest Log: -------------------
2019-05-04 02:19:45 (31820): Guest Log: Sat May 4 00:19:41 UTC 2019
2019-05-04 02:19:50 (31820): Guest Log: 00:00:05.010720 vminfo Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2019-05-04 02:19:50 (31820): Guest Log: Sat May 4 00:19:46 UTC 2019
2019-05-04 02:19:50 (31820): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default
2019-05-04 02:19:50 (31820): Guest Log: link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2019-05-04 02:19:50 (31820): Guest Log: inet 127.0.0.1/8 scope host lo
2019-05-04 02:19:50 (31820): Guest Log: valid_lft forever preferred_lft forever
2019-05-04 02:19:50 (31820): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default
2019-05-04 02:19:50 (31820): Guest Log: link/ether 1a:61:b1:54:03:90 brd ff:ff:ff:ff:ff:ff
2019-05-04 02:19:50 (31820): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2019-05-04 02:19:50 (31820): Guest Log: link/ether 08:00:27:38:52:84 brd ff:ff:ff:ff:ff:ff
2019-05-04 02:19:50 (31820): Guest Log: inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2019-05-04 02:19:50 (31820): Guest Log: valid_lft forever preferred_lft forever
2019-05-04 02:19:50 (31820): Guest Log: -------------------
2019-05-04 02:19:50 (31820): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2019-05-04 02:19:50 (31820): Guest Log: Waiting for Docker daemon to start...
2019-05-04 02:19:50 (31820): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE
2019-05-04 02:19:50 (31820): Guest Log: Running boinc_app...
2019-05-04 02:19:50 (31820): Guest Log: Importing Docker image from BOINC...
2019-05-04 02:19:55 (31820): Guest Log: 00:00:10.011320 vminfo Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2019-05-04 02:20:11 (31820): Guest Log: Prerun diagnostics...
2019-05-04 02:20:11 (31820): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE
2019-05-04 02:20:11 (31820): Guest Log: carlosred/htseq latest d0e2c46e8338 10 months ago 549.3 MB
2019-05-04 02:20:11 (31820): Guest Log: CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
2019-05-04 02:20:11 (31820): Guest Log: 557.0M /var/lib/docker
2019-05-04 02:20:11 (31820): Guest Log: total used free shared buff/cache available
2019-05-04 02:20:11 (31820): Guest Log: Mem: 2636 57 1814 721 764 1817
2019-05-04 02:20:11 (31820): Guest Log: Swap: 608 0 608
2019-05-04 02:20:11 (31820): Guest Log: Prerun commands...
2019-05-04 02:20:11 (31820): Guest Log: Running...
2019-05-04 02:20:11 (31820): Guest Log: % Total % Received % Xferd Average Speed Time Time Time Current
2019-05-04 02:20:11 (31820): Guest Log: Dload Upload Total Spent Left Speed
2019-05-04 02:20:11 (31820): Guest Log: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
2019-05-04 02:20:11 (31820): Guest Log: 100 364 100 364 0 0 440 0 --:--:-- --:--:-- --:--:-- 441
2019-05-04 02:20:11 (31820): Guest Log: % Total % Received % Xferd Average Speed Time Time Time Current
2019-05-04 02:20:11 (31820): Guest Log: Dload Upload Total Spent Left Speed
2019-05-04 02:20:11 (31820): Guest Log: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
2019-05-04 02:20:11 (31820): Guest Log: 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
2019-05-04 02:20:11 (31820): Guest Log: 100 17993 100 17993 0 0 31160 0 --:--:-- --:--:-- --:--:-- 31129
2019-05-04 02:20:11 (31820): Guest Log: 77 GFF lines processed.
2019-05-04 02:20:11 (31820): Guest Log: 2 SAM alignments processed.
2019-05-04 02:20:11 (31820): Guest Log: Postrun commands...
2019-05-04 02:20:11 (31820): Guest Log: boinc_app exited (0)
2019-05-04 02:20:11 (31820): Guest Log: Saving results...
2019-05-04 02:20:11 (31820): Guest Log: test_htseq.txt
2019-05-04 02:20:11 (31820): VM Completion File Detected.
2019-05-04 02:20:11 (31820): Powering off VM.
2019-05-04 02:20:12 (31820): Successfully stopped VM.
2019-05-04 02:20:12 (31820): Deregistering VM. (boinc_73211f25e856455f, slot#2)
2019-05-04 02:20:12 (31820): Removing network bandwidth throttle group from VM.
2019-05-04 02:20:12 (31820): Removing VM from VirtualBox.
2019-05-04 02:20:12 (31820): Removing virtual ISO 9660 disk from VirtualBox.
02:20:18 (31820): called boinc_finish(0)
</stderr_txt>
]]>