Task 126811

Name boinc2docker_12069_1555625328.139673_2
Workunit 53870
Created 19 Apr 2019, 7:04:27 UTC
Sent 19 Apr 2019, 7:05:08 UTC
Report deadline 26 Apr 2019, 7:05:08 UTC
Received 19 Apr 2019, 22:15:48 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 278
Run time 1 min 49 sec
CPU time 1 min 44 sec
Validate state Valid
Credit 12.17
Device peak FLOPS 13.13 GFLOPS
Application version boinc2docker v1.07 (vbox64_mt)
x86_64-apple-darwin
Peak working set size 143.62 MB
Peak swap size 6,525.53 MB
Peak disk usage 676.99 MB

Stderr output

<core_client_version>7.14.2</core_client_version>
<![CDATA[
<stderr_txt>
2019-04-19 17:13:51 (4675): vboxwrapper (7.7.26197): starting
2019-04-19 17:13:51 (4675): Feature: Checkpoint interval offset (540 seconds)
2019-04-19 17:13:51 (4675): Detected: VirtualBox VboxManage Interface (Version: 6.0.4)
2019-04-19 17:13:51 (4675): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-04-19 17:13:51 (4675): Create VM. (boinc_4d37cbc94c2790a8, slot#8)
2019-04-19 17:13:51 (4675): Updating drive controller type and model for desired configuration.
2019-04-19 17:13:51 (4675): Setting Memory Size for VM. (6392MB)
2019-04-19 17:13:51 (4675): Setting CPU Count for VM. (4)
2019-04-19 17:13:52 (4675): Setting Chipset Options for VM.
2019-04-19 17:13:52 (4675): Setting Boot Options for VM.
2019-04-19 17:13:52 (4675): Setting Network Configuration for NAT.
2019-04-19 17:13:52 (4675): Enabling VM Network Access.
2019-04-19 17:13:52 (4675): Disabling USB Support for VM.
2019-04-19 17:13:52 (4675): Disabling COM Port Support for VM.
2019-04-19 17:13:52 (4675): Disabling LPT Port Support for VM.
2019-04-19 17:13:52 (4675): Disabling Audio Support for VM.
2019-04-19 17:13:53 (4675): Disabling Clipboard Support for VM.
2019-04-19 17:13:53 (4675): Disabling Drag and Drop Support for VM.
2019-04-19 17:13:53 (4675): Adding storage controller(s) to VM.
2019-04-19 17:13:53 (4675): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2019-04-19 17:13:53 (4675): Adding VirtualBox Guest Additions to VM.
2019-04-19 17:13:53 (4675): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2019-04-19 17:13:53 (4675): Enabling shared directory for VM.
2019-04-19 17:13:54 (4675): Starting VM. (boinc_4d37cbc94c2790a8, slot#8)
2019-04-19 17:13:56 (4675): Successfully started VM. (PID = '5111')
2019-04-19 17:13:56 (4675): Reporting VM Process ID to BOINC.
2019-04-19 17:13:56 (4675): Guest Log: BIOS: VirtualBox 6.0.4
2019-04-19 17:13:56 (4675): Guest Log: CPUID EDX: 0x178bfbff
2019-04-19 17:13:57 (4675): VM state change detected. (old = 'poweroff', new = 'running')
2019-04-19 17:13:57 (4675): Preference change detected
2019-04-19 17:13:57 (4675): Setting CPU throttle for VM. (100%)
2019-04-19 17:13:57 (4675): Setting checkpoint interval to 1800 seconds. (Higher value of (Preference: 1800 seconds) or (Vbox_job.xml: 600 seconds))
2019-04-19 17:13:59 (4675): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2019-04-19 17:13:59 (4675): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2019-04-19 17:13:59 (4675): Guest Log: BIOS: Boot from Hard Disk 0 failed
2019-04-19 17:13:59 (4675): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2019-04-19 17:13:59 (4675): Guest Log: BIOS: Booting from CD-ROM...
2019-04-19 17:14:00 (4675): Guest Log: BIOS: KBD: unsupported int 16h function 03
2019-04-19 17:14:00 (4675): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2019-04-19 17:14:09 (4675): Guest Log: net.ipv4.ip_forward = 1
2019-04-19 17:14:09 (4675): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2019-04-19 17:14:09 (4675): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-04-19 17:14:09 (4675): Guest Log: sysctl: "cannot stat %s" is an unknown key
2019-04-19 17:14:09 (4675): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2019-04-19 17:14:09 (4675): Guest Log: Segmentation fault
2019-04-19 17:14:09 (4675): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2019-04-19 17:14:09 (4675): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2019-04-19 17:14:09 (4675): Guest Log: automount ...
2019-04-19 17:14:09 (4675): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2019-04-19 17:14:10 (4675): Guest Log: automount over.
2019-04-19 17:14:10 (4675): Guest Log: Setting hostname to boot2docker Done.
2019-04-19 17:14:10 (4675): Guest Log: Fri Apr 19 17:14:06 UTC 2019 dhcp -------------------------------
2019-04-19 17:14:14 (4675): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1112)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00 (1349)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:00 (1350)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:01 (1351)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:02 (1352)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:03 (1353)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00 (1354)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0 (1355)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0/event0 (1356)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00 (1357)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1358)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1359)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00 (1360)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1361)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1362)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1363)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1364)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1365)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6 (1366)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6/event5 (1367)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1368)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1369)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1370)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1371)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1372)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1373)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1374)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1375)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1376)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1377)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1378)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1379)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1380)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1381)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1382)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1383)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1384)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1385)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1386)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1387)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1388)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1389)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1390)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1391)
2019-04-19 17:14:14 (4675): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1392)
2019-04-19 17:14:15 (4675): Guest Log: Fri Apr 19 17:14:12 UTC 2019 dhcp -------------------------------
2019-04-19 17:14:15 (4675): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-04-19 17:14:15 (4675): Guest Log: 00:00:00.000100 main     Log opened 2019-04-19T17:14:12.692891000Z
2019-04-19 17:14:15 (4675): Guest Log: 00:00:00.000211 main     OS Product: Linux
2019-04-19 17:14:15 (4675): Guest Log: 00:00:00.000235 main     OS Release: 4.1.19-boot2docker
2019-04-19 17:14:15 (4675): Guest Log: 00:00:00.000256 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2019-04-19 17:14:15 (4675): Guest Log: 00:00:00.000276 main     Executable: /sbin/VBoxService
2019-04-19 17:14:15 (4675): Guest Log: 00:00:00.000277 main     Process ID: 857
2019-04-19 17:14:15 (4675): Guest Log: 00:00:00.000278 main     Package type: LINUX_64BITS_GENERIC
2019-04-19 17:14:15 (4675): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2019-04-19 17:14:15 (4675): Guest Log: 00:00:00.001284 main     5.0.16 r105871 started. Verbose level = 0
2019-04-19 17:14:15 (4675): Guest Log: 00:00:00.000100 main     Log opened 2019-04-19T17:14:12.692891000Z
2019-04-19 17:14:15 (4675): Guest Log: 00:00:00.000211 main     OS Product: Linux
2019-04-19 17:14:15 (4675): Guest Log: 00:00:00.000235 main     OS Release: 4.1.19-boot2docker
2019-04-19 17:14:15 (4675): Guest Log: 00:00:00.000256 main     OS Version: #1 SMP Sun Apr00:00:00.007157 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory 
2019-04-19 17:14:15 (4675): Guest Log: 19:40:00:00:00.007215 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2019-04-19 17:14:15 (4675): Guest Log: 4 UTC 2016
2019-04-19 17:14:15 (4675): Guest Log: 00:00:00.000276 main     Executable: /sbin/VBoxService
2019-04-19 17:14:15 (4675): Guest Log: 00:00:00.000277 main     Process ID: 857
2019-04-19 17:14:15 (4675): Guest Log: 00:00:00.000278 main     Package type: LINUX_64BITS_GENERIC
2019-04-19 17:14:15 (4675): Guest Log: 00:00:00.001284 main     5.0.16 r105871 started. Verbose level = 0
2019-04-19 17:14:15 (4675): Guest Log: Mounting BOINC shared/...
2019-04-19 17:14:16 (4675): Guest Log: -------------------
2019-04-19 17:14:16 (4675): Guest Log: Fri Apr 19 22:14:16 UTC 2019
2019-04-19 17:14:20 (4675): Guest Log: 00:00:05.019348 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2019-04-19 17:14:21 (4675): Guest Log: Fri Apr 19 22:14:21 UTC 2019
2019-04-19 17:14:21 (4675): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2019-04-19 17:14:21 (4675): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2019-04-19 17:14:21 (4675): Guest Log:     inet 127.0.0.1/8 scope host lo
2019-04-19 17:14:21 (4675): Guest Log:        valid_lft forever preferred_lft forever
2019-04-19 17:14:21 (4675): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2019-04-19 17:14:21 (4675): Guest Log:     link/ether 9e:7a:0a:9c:1f:16 brd ff:ff:ff:ff:ff:ff
2019-04-19 17:14:21 (4675): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2019-04-19 17:14:21 (4675): Guest Log:     link/ether 08:00:27:9d:f4:07 brd ff:ff:ff:ff:ff:ff
2019-04-19 17:14:21 (4675): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2019-04-19 17:14:21 (4675): Guest Log:        valid_lft forever preferred_lft forever
2019-04-19 17:14:21 (4675): Guest Log: -------------------
2019-04-19 17:14:21 (4675): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2019-04-19 17:14:21 (4675): Guest Log: Waiting for Docker daemon to start...
2019-04-19 17:14:22 (4675): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2019-04-19 17:14:22 (4675): Guest Log: Running boinc_app...
2019-04-19 17:14:22 (4675): Guest Log: Importing Docker image from BOINC...
2019-04-19 17:14:25 (4675): Guest Log: 00:00:10.020730 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2019-04-19 17:15:21 (4675): Guest Log: Prerun diagnostics...
2019-04-19 17:15:21 (4675): Guest Log: REPOSITORY             TAG                 IMAGE ID            CREATED             SIZE
2019-04-19 17:15:21 (4675): Guest Log: carlosred/mpi-lammps   latest              010869c6d9b8        9 months ago        1.473 GB
2019-04-19 17:15:21 (4675): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2019-04-19 17:15:21 (4675): Guest Log: 1.4G	/var/lib/docker
2019-04-19 17:15:21 (4675): Guest Log:               total        used        free      shared  buff/cache   available
2019-04-19 17:15:21 (4675): Guest Log: Mem:           6204          62        4449        1634        1692        4452
2019-04-19 17:15:21 (4675): Guest Log: Swap:          1499           0        1499
2019-04-19 17:15:21 (4675): Guest Log: Prerun commands...
2019-04-19 17:15:21 (4675): Guest Log: Running... 
2019-04-19 17:15:22 (4675): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
2019-04-19 17:15:22 (4675): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed
2019-04-19 17:15:27 (4675): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
2019-04-19 17:15:27 (4675): Guest Log:   0     0    0     0    0     0      0      0 --:--:--  0:00:01 --:--:--     0
2019-04-19 17:15:27 (4675): Guest Log:   0     0    0     0    0     0      0      0 --:--:--  0:00:02 --:--:--     0
2019-04-19 17:15:27 (4675): Guest Log:   0     0    0     0    0     0      0      0 --:--:--  0:00:03 --:--:--     0
2019-04-19 17:15:27 (4675): Guest Log:   0     0    0     0    0     0      0      0 --:--:--  0:00:04 --:--:--     0
2019-04-19 17:15:27 (4675): Guest Log:   1  762k    1 14339    0     0   2990      0  0:04:21  0:00:04  0:04:17  2989
2019-04-19 17:15:27 (4675): Guest Log: 100  762k  100  762k    0     0   135k      0  0:00:05  0:00:05 --:--:--  186k
2019-04-19 17:15:27 (4675): Guest Log:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
2019-04-19 17:15:27 (4675): Guest Log:                                  Dload  Upload   Total   Spent    Left  Speed
2019-04-19 17:15:30 (4675): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
2019-04-19 17:15:30 (4675): Guest Log:   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
2019-04-19 17:15:30 (4675): Guest Log:   0     0    0     0    0     0      0      0 --:--:--  0:00:01 --:--:--     0
2019-04-19 17:15:30 (4675): Guest Log:   0     0    0     0    0     0      0      0 --:--:--  0:00:02 --:--:--     0
2019-04-19 17:15:30 (4675): Guest Log: 100  1272  100  1272    0     0    466      0  0:00:02  0:00:02 --:--:--   466
2019-04-19 17:15:31 (4675): Guest Log: Postrun commands...
2019-04-19 17:15:31 (4675): Guest Log: boinc_app exited (0)
2019-04-19 17:15:31 (4675): Guest Log: Saving results...
2019-04-19 17:15:31 (4675): Guest Log: lammps_test.txt
2019-04-19 17:15:31 (4675): VM Completion File Detected.
2019-04-19 17:15:31 (4675): Powering off VM.
2019-04-19 17:15:31 (4675): Successfully stopped VM.
2019-04-19 17:15:31 (4675): Deregistering VM. (boinc_4d37cbc94c2790a8, slot#8)
2019-04-19 17:15:31 (4675): Removing network bandwidth throttle group from VM.
2019-04-19 17:15:32 (4675): Removing storage controller(s) from VM.
2019-04-19 17:15:32 (4675): Removing VM from VirtualBox.
2019-04-19 17:15:32 (4675): Removing virtual ISO 9660 disk from VirtualBox.
17:15:37 (4675): called boinc_finish(0)

</stderr_txt>
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