Task 106559

Name boinc2docker_20000_1554008321.820550_1
Workunit 49269
Created 31 Mar 2019, 4:58:46 UTC
Sent 31 Mar 2019, 8:20:47 UTC
Report deadline 7 Apr 2019, 8:20:47 UTC
Received 1 Apr 2019, 18:08:01 UTC
Server state Over
Outcome Computation error
Client state Compute error
Exit status 197 (0x000000C5) EXIT_TIME_LIMIT_EXCEEDED
Computer ID 107
Run time 3 hours 45 min 2 sec
CPU time 13 min 50 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 16.76 GFLOPS
Application version boinc2docker v1.07 (vbox64_mt)
windows_x86_64
Peak working set size 80.38 MB
Peak swap size 107.03 MB
Peak disk usage 450.44 MB

Stderr output

<core_client_version>7.8.3</core_client_version>
<![CDATA[
<message>
exceeded elapsed time limit 13480.40 (86400.00G/6.41G)</message>
<stderr_txt>
ing key "cannot stat %s": No such file or directory

2019-04-01 18:44:51 (10168): Guest Log: Segmentation fault

2019-04-01 18:44:51 (10168): Guest Log: automount ...

2019-04-01 18:44:51 (10168): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds

2019-04-01 18:44:51 (10168): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)

2019-04-01 18:44:51 (10168): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string

2019-04-01 18:44:51 (10168): Guest Log: automount over.

2019-04-01 18:44:51 (10168): Guest Log: Setting hostname to boot2docker Done.

2019-04-01 18:44:51 (10168): Guest Log: Mon Apr  1 18:38:22 UTC 2019 dhcp -------------------------------

2019-04-01 18:44:51 (10168): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1104)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00 (1337)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:00 (1338)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:01 (1339)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:02 (1340)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:03 (1341)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00 (1342)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0 (1343)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0/event0 (1344)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00 (1345)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1346)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1347)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00 (1348)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1349)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1350)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1351)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1352)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1353)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input7 (1354)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input7/event5 (1355)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1356)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1357)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1358)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1359)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1360)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1361)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1362)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1363)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1364)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1365)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1366)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1367)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1368)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1369)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1370)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1371)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1372)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1373)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1374)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1375)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1376)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1377)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1378)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1379)

2019-04-01 18:44:51 (10168): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1380)

2019-04-01 18:44:51 (10168): Guest Log: Mon Apr  1 18:38:28 UTC 2019 dhcp -------------------------------

2019-04-01 18:44:51 (10168): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log

2019-04-01 18:44:51 (10168): Guest Log: 00:00:00.000070 main     Log opened 2019-04-01T18:38:28.526029000Z

2019-04-01 18:44:51 (10168): Guest Log: 00:00:00.000161 main     OS Product: Linux

2019-04-01 18:44:51 (10168): Guest Log: 00:00:00.000193 main     OS Release: 4.1.19-boot2docker

2019-04-01 18:44:51 (10168): Guest Log: VB00:00:00.000232 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016o

2019-04-01 18:44:51 (10168): Guest Log: xSe00:00:00.000260 main     Executable: /sbin/VBoxServicer

2019-04-01 18:44:51 (10168): Guest Log: 00:00:00.000261 main     Process ID: 962

2019-04-01 18:44:51 (10168): Guest Log: 00:00:00.000262 main     Package type: LINUX_64BITS_GENERIC

2019-04-01 18:44:51 (10168): Guest Log: ice 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log

2019-04-01 18:44:51 (10168): Guest Log: 00:00:00.000070 main     Log opened 2019-04-01T18:38:28.526029000Z

2019-04-01 18:44:51 (10168): Guest Log: 00:00:00.000161 main     OS Product: Linux

2019-04-01 18:44:51 (10168): Guest Log: 00:00:00.000193 main     OS Release: 4.1.19-boot2docker

2019-04-01 18:44:51 (10168): Guest Log: 00:00:00.000232 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016

2019-04-01 18:44:51 (10168): Guest Log: 00:00:00.000260 main     Executable: /sbin/VBoxService

2019-04-01 18:44:51 (10168): Guest Log: 00:00:00.000261 main     Process ID: 962

2019-04-01 18:44:51 (10168): Guest Log: 00:00:00.000262 main     Package type: LINUX_64BITS_GENERIC

2019-04-01 18:44:51 (10168): Guest Log: 00:00:00.009669 main     5.0.16 r105871 started. Verbose level = 0

2019-04-01 18:44:51 (10168): Guest Log: 00:00:00.009669 main     5.0.16 r105871 started. Verbose level = 0

2019-04-01 18:44:51 (10168): Guest Log: 00:00:00.014086 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory

2019-04-01 18:44:51 (10168): Guest Log: 00:00:00.014146 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed

2019-04-01 18:44:51 (10168): Guest Log: Mounting BOINC shared/...

2019-04-01 18:44:51 (10168): Guest Log: -------------------

2019-04-01 18:44:51 (10168): Guest Log: Mon Apr  1 16:38:30 UTC 2019

2019-04-01 18:44:51 (10168): Guest Log: 00:00:05.023643 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed

2019-04-01 18:44:51 (10168): Guest Log: Mon Apr  1 16:38:35 UTC 2019

2019-04-01 18:44:51 (10168): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 

2019-04-01 18:44:51 (10168): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00

2019-04-01 18:44:51 (10168): Guest Log:     inet 127.0.0.1/8 scope host lo

2019-04-01 18:44:51 (10168): Guest Log:        valid_lft forever preferred_lft forever

2019-04-01 18:44:51 (10168): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 

2019-04-01 18:44:51 (10168): Guest Log:     link/ether 32:47:11:af:d7:c1 brd ff:ff:ff:ff:ff:ff

2019-04-01 18:44:51 (10168): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000

2019-04-01 18:44:51 (10168): Guest Log:     link/ether 08:00:27:9b:00:a4 brd ff:ff:ff:ff:ff:ff

2019-04-01 18:44:51 (10168): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0

2019-04-01 18:44:51 (10168): Guest Log:        valid_lft forever preferred_lft forever

2019-04-01 18:44:51 (10168): Guest Log: -------------------

2019-04-01 18:44:51 (10168): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence

2019-04-01 18:44:51 (10168): Guest Log: Waiting for Docker daemon to start...

2019-04-01 18:44:51 (10168): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE

2019-04-01 18:44:51 (10168): Guest Log: Running boinc_app...

2019-04-01 18:44:51 (10168): Guest Log: Importing Docker image from BOINC...

2019-04-01 18:44:51 (10168): Guest Log: 00:00:10.027772 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed

2019-04-01 18:44:51 (10168): Guest Log: Prerun diagnostics...

2019-04-01 18:44:51 (10168): Guest Log: REPOSITORY           TAG                 IMAGE ID            CREATED             SIZE

2019-04-01 18:44:51 (10168): Guest Log: carlosred/bedtools   latest              4ddcf547f34b        10 months ago       1.192 GB

2019-04-01 18:44:51 (10168): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES

2019-04-01 18:44:51 (10168): Guest Log: 1.2G	/var/lib/docker

2019-04-01 18:44:51 (10168): Guest Log:               total        used        free      shared  buff/cache   available

2019-04-01 18:44:51 (10168): Guest Log: Mem:           5096          66        3586        1376        1444        3593

2019-04-01 18:44:51 (10168): Guest Log: Swap:          1221           0        1221

2019-04-01 18:44:51 (10168): Guest Log: Prerun commands...

2019-04-01 18:44:51 (10168): Guest Log: Running... 

2019-04-01 18:44:51 (10168): Guest Log: --2019-04-01 16:39:19--  http://boinc.tacc.utexas.edu:5060/boincserver/v2/reef/carlos.red@utexas.edu/cpg.bed

2019-04-01 18:44:51 (10168): Guest Log: Resolving boinc.tacc.utexas.edu (boinc.tacc.utexas.edu)... 129.114.60.78

2019-04-01 18:44:51 (10168): Guest Log: Connecting to boinc.tacc.utexas.edu (boinc.tacc.utexas.edu)|129.114.60.78|:5060... failed: Connection timed out.

2019-04-01 18:44:51 (10168): Guest Log: Retrying.

2019-04-01 18:44:51 (10168): Guest Log: --2019-04-01 16:41:31--  (try: 2)  http://boinc.tacc.utexas.edu:5060/boincserver/v2/reef/carlos.red@utexas.edu/cpg.bed

2019-04-01 18:44:51 (10168): Guest Log: Connecting to boinc.tacc.utexas.edu (boinc.tacc.utexas.edu)|129.114.60.78|:5060... failed: Connection timed out.

2019-04-01 18:44:51 (10168): Guest Log: Retrying.

2019-04-01 18:44:51 (10168): Guest Log: --2019-04-01 16:43:40--  (try: 3)  http://boinc.tacc.utexas.edu:5060/boincserver/v2/reef/carlos.red@utexas.edu/cpg.bed

2019-04-01 18:44:51 (10168): Starting VM. (boinc_69b3b36b06072eb3, slot#0)
2019-04-01 18:44:58 (10168): Successfully started VM. (PID = '9156')
2019-04-01 18:44:58 (10168): Reporting VM Process ID to BOINC.
2019-04-01 18:45:03 (10168): VM state change detected. (old = 'poweroff', new = 'running')
2019-04-01 18:45:13 (10168): Status Report: Elapsed Time: '12615.848011'
2019-04-01 18:45:13 (10168): Status Report: CPU Time: '604.971878'
2019-04-01 18:45:13 (10168): Preference change detected
2019-04-01 18:45:13 (10168): Setting CPU throttle for VM. (100%)
2019-04-01 18:45:13 (10168): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2019-04-01 18:51:38 (10168): Powering off VM.
2019-04-01 18:51:39 (10168): Successfully stopped VM.
2019-04-01 18:51:46 (12220): vboxwrapper (7.9.26200): starting
2019-04-01 18:51:46 (12220): Feature: Checkpoint interval offset (131 seconds)
2019-04-01 18:51:46 (12220): Detected: VirtualBox COM Interface (Version: 5.1.28)
2019-04-01 18:51:46 (12220): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-04-01 18:51:46 (12220): Guest Log: BIOS: VirtualBox 5.1.28

2019-04-01 18:51:46 (12220): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032

2019-04-01 18:51:46 (12220): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80

2019-04-01 18:51:46 (12220): Guest Log: BIOS: Boot from Hard Disk 0 failed

2019-04-01 18:51:46 (12220): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003

2019-04-01 18:51:46 (12220): Guest Log: BIOS: Booting from CD-ROM...

2019-04-01 18:51:46 (12220): Guest Log: BIOS: KBD: unsupported int 16h function 03

2019-04-01 18:51:46 (12220): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 

2019-04-01 18:51:46 (12220): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds

2019-04-01 18:51:46 (12220): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)

2019-04-01 18:51:46 (12220): Guest Log: net.ipv4.ip_forward = 1

2019-04-01 18:51:46 (12220): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory

2019-04-01 18:51:46 (12220): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory

2019-04-01 18:51:46 (12220): Guest Log: sysctl: "cannot stat %s" is an unknown key

2019-04-01 18:51:46 (12220): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory

2019-04-01 18:51:46 (12220): Guest Log: Segmentation fault

2019-04-01 18:51:46 (12220): Guest Log: automount ...

2019-04-01 18:51:46 (12220): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string

2019-04-01 18:51:46 (12220): Guest Log: automount over.

2019-04-01 18:51:46 (12220): Guest Log: Setting hostname to boot2docker Done.

2019-04-01 18:51:46 (12220): Guest Log: Mon Apr  1 18:45:03 UTC 2019 dhcp -------------------------------

2019-04-01 18:51:46 (12220): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1110)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00 (1349)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:00 (1350)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:01 (1351)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:02 (1352)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:03 (1353)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00 (1354)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0 (1355)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0/event0 (1356)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00 (1357)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1358)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1359)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00 (1360)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1361)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1362)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1363)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1364)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1365)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input8 (1366)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input8/event6 (1367)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1368)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1369)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1370)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1371)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1372)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1373)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1374)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1375)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1376)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1377)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1378)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1379)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1380)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1381)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1382)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1383)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1384)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1385)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1386)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1387)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1388)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1389)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1390)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1391)

2019-04-01 18:51:46 (12220): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1392)

2019-04-01 18:51:46 (12220): Guest Log: Mon Apr  1 18:45:09 UTC 2019 dhcp -------------------------------

2019-04-01 18:51:46 (12220): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log

2019-04-01 18:51:46 (12220): Guest Log: 00:00:00.000084 main     Log opened 2019-04-01T18:45:09.585305000Z

2019-04-01 18:51:46 (12220): Guest Log: 00:00:00.000194 main     OS Product: Linux

2019-04-01 18:51:46 (12220): Guest Log: 00:00:00.000225 main     OS Release: 4.1.19-boot2docker

2019-04-01 18:51:46 (12220): Guest Log: 00:00:00.000296 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016

2019-04-01 18:51:46 (12220): Guest Log: VBo00:00:00.000324 main     Executable: /sbin/VBoxService

2019-04-01 18:51:46 (12220): Guest Log: 00:00:00.000325 main     Process ID: 888

2019-04-01 18:51:46 (12220): Guest Log: 00:00:00.000326 main     Package type: LINUX_64BITS_GENERIC

2019-04-01 18:51:46 (12220): Guest Log: Service 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log

2019-04-01 18:51:46 (12220): Guest Log: 00:00:00.000084 main     Log opened 2019-04-01T18:45:09.585305000Z

2019-04-01 18:51:46 (12220): Guest Log: 00:00:00.000194 main     OS Product: Linux

2019-04-01 18:51:46 (12220): Guest Log: 00:00:00.000225 main     OS Release: 4.1.19-boot2docker

2019-04-01 18:51:46 (12220): Guest Log: 00:00:00.000296 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016

2019-04-01 18:51:46 (12220): Guest Log: 00:00:00.000324 main     Executable: /sbin/VBoxService

2019-04-01 18:51:46 (12220): Guest Log: 00:00:00.000325 main     Process ID:00:00:00.008171 main     5.0.16 r105871 started. Verbose level = 0 

2019-04-01 18:51:46 (12220): Guest Log: 88

2019-04-01 18:51:46 (12220): Guest Log: 00:00:00.000326 main     Package type: LINUX_64BITS_GENERIC

2019-04-01 18:51:46 (12220): Guest Log: 00:00:00.008171 main     5.0.16 r105871 started. Verbose level = 0

2019-04-01 18:51:46 (12220): Guest Log: 00:00:00.012956 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory

2019-04-01 18:51:46 (12220): Guest Log: 00:00:00.013011 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed

2019-04-01 18:51:46 (12220): Guest Log: Mounting BOINC shared/...

2019-04-01 18:51:46 (12220): Guest Log: -------------------

2019-04-01 18:51:46 (12220): Guest Log: Mon Apr  1 16:45:11 UTC 2019

2019-04-01 18:51:46 (12220): Guest Log: 00:00:05.014615 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed

2019-04-01 18:51:46 (12220): Guest Log: Mon Apr  1 16:45:16 UTC 2019

2019-04-01 18:51:46 (12220): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 

2019-04-01 18:51:46 (12220): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00

2019-04-01 18:51:46 (12220): Guest Log:     inet 127.0.0.1/8 scope host lo

2019-04-01 18:51:46 (12220): Guest Log:        valid_lft forever preferred_lft forever

2019-04-01 18:51:46 (12220): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 

2019-04-01 18:51:46 (12220): Guest Log:     link/ether 26:4a:f2:cf:ae:ce brd ff:ff:ff:ff:ff:ff

2019-04-01 18:51:46 (12220): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000

2019-04-01 18:51:46 (12220): Guest Log:     link/ether 08:00:27:9b:00:a4 brd ff:ff:ff:ff:ff:ff

2019-04-01 18:51:46 (12220): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0

2019-04-01 18:51:46 (12220): Guest Log:        valid_lft forever preferred_lft forever

2019-04-01 18:51:46 (12220): Guest Log: -------------------

2019-04-01 18:51:46 (12220): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence

2019-04-01 18:51:46 (12220): Guest Log: Waiting for Docker daemon to start...

2019-04-01 18:51:46 (12220): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE

2019-04-01 18:51:46 (12220): Guest Log: Running boinc_app...

2019-04-01 18:51:46 (12220): Guest Log: Importing Docker image from BOINC...

2019-04-01 18:51:46 (12220): Guest Log: 00:00:10.015507 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed

2019-04-01 18:51:46 (12220): Guest Log: Prerun diagnostics...

2019-04-01 18:51:46 (12220): Guest Log: REPOSITORY           TAG                 IMAGE ID            CREATED             SIZE

2019-04-01 18:51:46 (12220): Guest Log: carlosred/bedtools   latest              4ddcf547f34b        10 months ago       1.192 GB

2019-04-01 18:51:46 (12220): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES

2019-04-01 18:51:46 (12220): Guest Log: 1.2G	/var/lib/docker

2019-04-01 18:51:46 (12220): Guest Log:               total        used        free      shared  buff/cache   available

2019-04-01 18:51:46 (12220): Guest Log: Mem:           5096          65        3587        1376        1444        3594

2019-04-01 18:51:46 (12220): Guest Log: Swap:          1221           0        1221

2019-04-01 18:51:46 (12220): Guest Log: Prerun commands...

2019-04-01 18:51:46 (12220): Guest Log: Running... 

2019-04-01 18:51:46 (12220): Guest Log: --2019-04-01 16:45:58--  http://boinc.tacc.utexas.edu:5060/boincserver/v2/reef/carlos.red@utexas.edu/cpg.bed

2019-04-01 18:51:46 (12220): Guest Log: Resolving boinc.tacc.utexas.edu (boinc.tacc.utexas.edu)... 129.114.60.78

2019-04-01 18:51:46 (12220): Guest Log: Connecting to boinc.tacc.utexas.edu (boinc.tacc.utexas.edu)|129.114.60.78|:5060... failed: Connection timed out.

2019-04-01 18:51:46 (12220): Guest Log: Retrying.

2019-04-01 18:51:46 (12220): Guest Log: --2019-04-01 16:48:09--  (try: 2)  http://boinc.tacc.utexas.edu:5060/boincserver/v2/reef/carlos.red@utexas.edu/cpg.bed

2019-04-01 18:51:46 (12220): Guest Log: Connecting to boinc.tacc.utexas.edu (boinc.tacc.utexas.edu)|129.114.60.78|:5060... failed: Connection timed out.

2019-04-01 18:51:46 (12220): Guest Log: Retrying.

2019-04-01 18:51:46 (12220): Guest Log: --2019-04-01 16:50:19--  (try: 3)  http://boinc.tacc.utexas.edu:5060/boincserver/v2/reef/carlos.red@utexas.edu/cpg.bed

2019-04-01 18:51:46 (12220): Starting VM. (boinc_69b3b36b06072eb3, slot#0)
2019-04-01 18:51:53 (12220): Successfully started VM. (PID = '10356')
2019-04-01 18:51:53 (12220): Reporting VM Process ID to BOINC.
2019-04-01 18:51:58 (12220): VM state change detected. (old = 'poweroff', new = 'running')
2019-04-01 18:52:08 (12220): Status Report: Elapsed Time: '12956.237236'
2019-04-01 18:52:08 (12220): Status Report: CPU Time: '661.054238'
2019-04-01 18:52:08 (12220): Preference change detected
2019-04-01 18:52:08 (12220): Setting CPU throttle for VM. (100%)
2019-04-01 18:52:08 (12220): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2019-04-01 18:58:38 (12220): Powering off VM.
2019-04-01 18:58:40 (12220): Successfully stopped VM.
2019-04-01 18:58:45 (9432): vboxwrapper (7.9.26200): starting
2019-04-01 18:58:45 (9432): Feature: Checkpoint interval offset (564 seconds)
2019-04-01 18:58:45 (9432): Detected: VirtualBox COM Interface (Version: 5.1.28)
2019-04-01 18:58:45 (9432): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-04-01 18:58:45 (9432): Guest Log: BIOS: VirtualBox 5.1.28

2019-04-01 18:58:45 (9432): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032

2019-04-01 18:58:45 (9432): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80

2019-04-01 18:58:45 (9432): Guest Log: BIOS: Boot from Hard Disk 0 failed

2019-04-01 18:58:45 (9432): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003

2019-04-01 18:58:45 (9432): Guest Log: BIOS: Booting from CD-ROM...

2019-04-01 18:58:45 (9432): Guest Log: BIOS: KBD: unsupported int 16h function 03

2019-04-01 18:58:45 (9432): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 

2019-04-01 18:58:45 (9432): Guest Log: net.ipv4.ip_forward = 1

2019-04-01 18:58:45 (9432): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory

2019-04-01 18:58:45 (9432): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory

2019-04-01 18:58:45 (9432): Guest Log: sysctl: "cannot stat %s" is an unknown key

2019-04-01 18:58:45 (9432): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory

2019-04-01 18:58:45 (9432): Guest Log: Segmentation fault

2019-04-01 18:58:45 (9432): Guest Log: automount ...

2019-04-01 18:58:45 (9432): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds

2019-04-01 18:58:45 (9432): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)

2019-04-01 18:58:45 (9432): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string

2019-04-01 18:58:45 (9432): Guest Log: automount over.

2019-04-01 18:58:45 (9432): Guest Log: Setting hostname to boot2docker Done.

2019-04-01 18:58:45 (9432): Guest Log: Mon Apr  1 18:51:58 UTC 2019 dhcp -------------------------------

2019-04-01 18:58:45 (9432): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1104)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00 (1337)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:00 (1338)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:01 (1339)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:02 (1340)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:03 (1341)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00 (1342)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0 (1343)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0/event0 (1344)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00 (1345)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1346)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1347)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00 (1348)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1349)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1350)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1351)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1352)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1353)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input7 (1354)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input7/event5 (1355)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1356)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1357)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1358)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1359)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1360)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1361)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1362)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1363)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1364)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1365)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1366)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1367)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1368)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1369)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1370)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1371)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1372)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1373)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1374)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1375)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1376)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1377)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1378)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1379)

2019-04-01 18:58:45 (9432): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1380)

2019-04-01 18:58:45 (9432): Guest Log: Mon Apr  1 18:52:04 UTC 2019 dhcp -------------------------------

2019-04-01 18:58:45 (9432): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log

2019-04-01 18:58:45 (9432): Guest Log: 00:00:00.000066 main     Log opened 2019-04-01T18:52:04.777093000Z

2019-04-01 18:58:45 (9432): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log

2019-04-01 18:58:45 (9432): Guest Log: 00:00:00.000066 main     Log opened 2019-04-01T18:52:04.777093000Z

2019-04-01 18:58:45 (9432): Guest Log: 00:00:00.002819 main     OS Product: Linux

2019-04-01 18:58:45 (9432): Guest Log: 00:00:00.002819 main     OS Product: Linux

2019-04-01 18:58:45 (9432): Guest Log: 00:00:00.003763 main     OS Release: 4.1.19-boot2docker

2019-04-01 18:58:45 (9432): Guest Log: 00:00:00.003763 main     OS Release: 4.1.19-boot2docker

2019-04-01 18:58:45 (9432): Guest Log: 00:00:00.004949 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016

2019-04-01 18:58:45 (9432): Guest Log: 00:00:00.004949 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016

2019-04-01 18:58:45 (9432): Guest Log: 00:00:00.006169 main     Executable: /sbin/VBoxService

2019-04-01 18:58:45 (9432): Guest Log: 00:00:00.006171 main     Process ID: 894

2019-04-01 18:58:45 (9432): Guest Log: 00:00:00.006171 main     Package type: LINUX_64BITS_GENERIC

2019-04-01 18:58:45 (9432): Guest Log: 00:00:00.006169 main     Executable: /sbin/VBoxService

2019-04-01 18:58:45 (9432): Guest Log: 00:00:00.006171 main     Process ID: 894

2019-04-01 18:58:45 (9432): Guest Log: 00:00:00.006171 main     Package type: LINUX_64BITS_GENERIC

2019-04-01 18:58:45 (9432): Guest Log: 00:00:00.009659 main     5.0.16 r105871 started. Verbose level = 0

2019-04-01 18:58:45 (9432): Guest Log: 00:00:00.009659 main     5.0.16 r105871 started. Verbose level = 0

2019-04-01 18:58:45 (9432): Guest Log: 00:00:00.013849 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory

2019-04-01 18:58:45 (9432): Guest Log: 00:00:00.013914 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed

2019-04-01 18:58:45 (9432): Guest Log: Mounting BOINC shared/...

2019-04-01 18:58:45 (9432): Guest Log: -------------------

2019-04-01 18:58:45 (9432): Guest Log: Mon Apr  1 16:52:06 UTC 2019

2019-04-01 18:58:45 (9432): Guest Log: 00:00:05.015124 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed

2019-04-01 18:58:45 (9432): Guest Log: Mon Apr  1 16:52:11 UTC 2019

2019-04-01 18:58:45 (9432): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 

2019-04-01 18:58:45 (9432): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00

2019-04-01 18:58:45 (9432): Guest Log:     inet 127.0.0.1/8 scope host lo

2019-04-01 18:58:45 (9432): Guest Log:        valid_lft forever preferred_lft forever

2019-04-01 18:58:45 (9432): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 

2019-04-01 18:58:45 (9432): Guest Log:     link/ether 3a:6b:0e:6e:68:d6 brd ff:ff:ff:ff:ff:ff

2019-04-01 18:58:45 (9432): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000

2019-04-01 18:58:45 (9432): Guest Log:     link/ether 08:00:27:9b:00:a4 brd ff:ff:ff:ff:ff:ff

2019-04-01 18:58:45 (9432): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0

2019-04-01 18:58:45 (9432): Guest Log:        valid_lft forever preferred_lft forever

2019-04-01 18:58:45 (9432): Guest Log: -------------------

2019-04-01 18:58:45 (9432): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence

2019-04-01 18:58:45 (9432): Guest Log: Waiting for Docker daemon to start...

2019-04-01 18:58:45 (9432): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE

2019-04-01 18:58:45 (9432): Guest Log: Running boinc_app...

2019-04-01 18:58:45 (9432): Guest Log: Importing Docker image from BOINC...

2019-04-01 18:58:45 (9432): Guest Log: 00:00:10.015714 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed

2019-04-01 18:58:45 (9432): Guest Log: Prerun diagnostics...

2019-04-01 18:58:45 (9432): Guest Log: REPOSITORY           TAG                 IMAGE ID            CREATED             SIZE

2019-04-01 18:58:45 (9432): Guest Log: carlosred/bedtools   latest              4ddcf547f34b        10 months ago       1.192 GB

2019-04-01 18:58:45 (9432): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES

2019-04-01 18:58:45 (9432): Guest Log: 1.2G	/var/lib/docker

2019-04-01 18:58:45 (9432): Guest Log:               total        used        free      shared  buff/cache   available

2019-04-01 18:58:45 (9432): Guest Log: Mem:           5096          61        3591        1376        1443        3598

2019-04-01 18:58:45 (9432): Guest Log: Swap:          1222           0        1222

2019-04-01 18:58:45 (9432): Guest Log: Prerun commands...

2019-04-01 18:58:45 (9432): Guest Log: Running... 

2019-04-01 18:58:45 (9432): Guest Log: --2019-04-01 16:52:51--  http://boinc.tacc.utexas.edu:5060/boincserver/v2/reef/carlos.red@utexas.edu/cpg.bed

2019-04-01 18:58:45 (9432): Guest Log: Resolving boinc.tacc.utexas.edu (boinc.tacc.utexas.edu)... 129.114.60.78

2019-04-01 18:58:45 (9432): Guest Log: Connecting to boinc.tacc.utexas.edu (boinc.tacc.utexas.edu)|129.114.60.78|:5060... failed: Connection timed out.

2019-04-01 18:58:45 (9432): Guest Log: Retrying.

2019-04-01 18:58:45 (9432): Guest Log: --2019-04-01 16:55:02--  (try: 2)  http://boinc.tacc.utexas.edu:5060/boincserver/v2/reef/carlos.red@utexas.edu/cpg.bed

2019-04-01 18:58:45 (9432): Guest Log: Connecting to boinc.tacc.utexas.edu (boinc.tacc.utexas.edu)|129.114.60.78|:5060... failed: Connection timed out.

2019-04-01 18:58:45 (9432): Guest Log: Retrying.

2019-04-01 18:58:45 (9432): Guest Log: --2019-04-01 16:57:12--  (try: 3)  http://boinc.tacc.utexas.edu:5060/boincserver/v2/reef/carlos.red@utexas.edu/cpg.bed

2019-04-01 18:58:45 (9432): Starting VM. (boinc_69b3b36b06072eb3, slot#0)
2019-04-01 18:58:53 (9432): Successfully started VM. (PID = '11432')
2019-04-01 18:58:53 (9432): Reporting VM Process ID to BOINC.
2019-04-01 18:58:58 (9432): VM state change detected. (old = 'poweroff', new = 'running')
2019-04-01 18:59:08 (9432): Status Report: Elapsed Time: '13296.715471'
2019-04-01 18:59:08 (9432): Status Report: CPU Time: '716.762195'
2019-04-01 18:59:08 (9432): Preference change detected
2019-04-01 18:59:08 (9432): Setting CPU throttle for VM. (100%)
2019-04-01 18:59:08 (9432): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2019-04-01 19:04:53 (9432): Powering off VM.
2019-04-01 19:04:54 (9432): Successfully stopped VM.
2019-04-01 19:05:01 (10720): vboxwrapper (7.9.26200): starting
2019-04-01 19:05:01 (10720): Feature: Checkpoint interval offset (41 seconds)
2019-04-01 19:05:01 (10720): Detected: VirtualBox COM Interface (Version: 5.1.28)
2019-04-01 19:05:01 (10720): Detected: Minimum checkpoint interval (600.000000 seconds)
2019-04-01 19:05:01 (10720): Guest Log: BIOS: VirtualBox 5.1.28

2019-04-01 19:05:01 (10720): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032

2019-04-01 19:05:01 (10720): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80

2019-04-01 19:05:01 (10720): Guest Log: BIOS: Boot from Hard Disk 0 failed

2019-04-01 19:05:01 (10720): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003

2019-04-01 19:05:01 (10720): Guest Log: BIOS: Booting from CD-ROM...

2019-04-01 19:05:01 (10720): Guest Log: BIOS: KBD: unsupported int 16h function 03

2019-04-01 19:05:01 (10720): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 

2019-04-01 19:05:01 (10720): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds

2019-04-01 19:05:01 (10720): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)

2019-04-01 19:05:01 (10720): Guest Log: net.ipv4.ip_forward = 1

2019-04-01 19:05:01 (10720): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory

2019-04-01 19:05:01 (10720): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory

2019-04-01 19:05:01 (10720): Guest Log: sysctl: "cannot stat %s" is an unknown key

2019-04-01 19:05:01 (10720): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory

2019-04-01 19:05:01 (10720): Guest Log: Segmentation fault

2019-04-01 19:05:01 (10720): Guest Log: automount ...

2019-04-01 19:05:01 (10720): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string

2019-04-01 19:05:01 (10720): Guest Log: automount over.

2019-04-01 19:05:01 (10720): Guest Log: Setting hostname to boot2docker Done.

2019-04-01 19:05:01 (10720): Guest Log: Mon Apr  1 18:58:58 UTC 2019 dhcp -------------------------------

2019-04-01 19:05:01 (10720): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1114)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00 (1354)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:00 (1355)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:01 (1356)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:02 (1357)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXCPU:03 (1358)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00 (1359)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0 (1360)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXPWRBN:00/input/input0/event0 (1361)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00 (1362)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1363)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1364)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00 (1365)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00 (1366)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00 (1367)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/ACPI0003:00/power_supply/AC (1368)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00 (1369)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/device:01 (1370)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input7 (1371)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input7/event5 (1372)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1373)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1374)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1375)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1376)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1377)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1378)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1379)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1380)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1381)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00 (1382)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1383)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1384)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1385)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1386)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1387)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1388)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1389)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1390)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1391)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:02 (1392)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1393)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1394)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1395)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1396)

2019-04-01 19:05:01 (10720): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:01 (1397)

2019-04-01 19:05:01 (10720): Guest Log: Mon Apr  1 18:59:04 UTC 2019 dhcp -------------------------------

2019-04-01 19:05:01 (10720): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log

2019-04-01 19:05:01 (10720): Guest Log: 00:00:00.000075 main     Log opened 2019-04-01T18:59:04.433654000Z

2019-04-01 19:05:01 (10720): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log

2019-04-01 19:05:01 (10720): Guest Log: 00:00:00.000075 main     Log opened 2019-04-01T18:59:04.433654000Z

2019-04-01 19:05:01 (10720): Guest Log: 00:00:00.003027 main     OS Product: Linux

2019-04-01 19:05:01 (10720): Guest Log: 00:00:00.003027 main     OS Product: Linux

2019-04-01 19:05:01 (10720): Guest Log: 00:00:00.004003 main     OS Release: 4.1.19-boot2docker

2019-04-01 19:05:01 (10720): Guest Log: 00:00:00.004003 main     OS Release: 4.1.19-boot2docker

2019-04-01 19:05:01 (10720): Guest Log: 00:00:00.005081 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016

2019-04-01 19:05:01 (10720): Guest Log: 00:00:00.005081 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016

2019-04-01 19:05:01 (10720): Guest Log: 00:00:00.006358 main     Executable: /sbin/VBoxService

2019-04-01 19:05:01 (10720): Guest Log: 00:00:00.006360 main     Process ID: 926

2019-04-01 19:05:01 (10720): Guest Log: 00:00:00.006360 main     Package type: LINUX_64BITS_GENERIC

2019-04-01 19:05:01 (10720): Guest Log: 00:00:00.006358 main     Executable: /sbin/VBoxService

2019-04-01 19:05:01 (10720): Guest Log: 00:00:00.006360 main     Process ID: 926

2019-04-01 19:05:01 (10720): Guest Log: 00:00:00.006360 main     Package type: LINUX_64BITS_GENERIC

2019-04-01 19:05:01 (10720): Guest Log: 00:00:00.009973 main     5.0.16 r105871 started. Verbose level = 0

2019-04-01 19:05:01 (10720): Guest Log: 00:00:00.009973 main     5.0.16 r105871 started. Verbose level = 0

2019-04-01 19:05:01 (10720): Guest Log: 00:00:00.012659 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory

2019-04-01 19:05:01 (10720): Guest Log: 00:00:00.012711 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed

2019-04-01 19:05:01 (10720): Guest Log: Mounting BOINC shared/...

2019-04-01 19:05:01 (10720): Guest Log: -------------------

2019-04-01 19:05:01 (10720): Guest Log: Mon Apr  1 16:59:06 UTC 2019

2019-04-01 19:05:01 (10720): Guest Log: 00:00:05.014958 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed

2019-04-01 19:05:01 (10720): Guest Log: Mon Apr  1 16:59:11 UTC 2019

2019-04-01 19:05:01 (10720): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 

2019-04-01 19:05:01 (10720): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00

2019-04-01 19:05:01 (10720): Guest Log:     inet 127.0.0.1/8 scope host lo

2019-04-01 19:05:01 (10720): Guest Log:        valid_lft forever preferred_lft forever

2019-04-01 19:05:01 (10720): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 

2019-04-01 19:05:01 (10720): Guest Log:     link/ether 56:ed:a3:d9:3c:e9 brd ff:ff:ff:ff:ff:ff

2019-04-01 19:05:01 (10720): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000

2019-04-01 19:05:01 (10720): Guest Log:     link/ether 08:00:27:9b:00:a4 brd ff:ff:ff:ff:ff:ff

2019-04-01 19:05:01 (10720): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0

2019-04-01 19:05:01 (10720): Guest Log:        valid_lft forever preferred_lft forever

2019-04-01 19:05:01 (10720): Guest Log: -------------------

2019-04-01 19:05:01 (10720): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence

2019-04-01 19:05:01 (10720): Guest Log: Waiting for Docker daemon to start...

2019-04-01 19:05:01 (10720): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE

2019-04-01 19:05:01 (10720): Guest Log: Running boinc_app...

2019-04-01 19:05:01 (10720): Guest Log: Importing Docker image from BOINC...

2019-04-01 19:05:01 (10720): Guest Log: 00:00:10.015732 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed

2019-04-01 19:05:01 (10720): Guest Log: Prerun diagnostics...

2019-04-01 19:05:01 (10720): Guest Log: REPOSITORY           TAG                 IMAGE ID            CREATED             SIZE

2019-04-01 19:05:01 (10720): Guest Log: carlosred/bedtools   latest              4ddcf547f34b        10 months ago       1.192 GB

2019-04-01 19:05:01 (10720): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES

2019-04-01 19:05:01 (10720): Guest Log: 1.2G	/var/lib/docker

2019-04-01 19:05:01 (10720): Guest Log:               total        used        free      shared  buff/cache   available

2019-04-01 19:05:01 (10720): Guest Log: Mem:           5096          66        3585        1376        1444        3593

2019-04-01 19:05:01 (10720): Guest Log: Swap:          1221           0        1221

2019-04-01 19:05:01 (10720): Guest Log: Prerun commands...

2019-04-01 19:05:01 (10720): Guest Log: Running... 

2019-04-01 19:05:01 (10720): Guest Log: --2019-04-01 16:59:50--  http://boinc.tacc.utexas.edu:5060/boincserver/v2/reef/carlos.red@utexas.edu/cpg.bed

2019-04-01 19:05:01 (10720): Guest Log: Resolving boinc.tacc.utexas.edu (boinc.tacc.utexas.edu)... 129.114.60.78

2019-04-01 19:05:01 (10720): Guest Log: Connecting to boinc.tacc.utexas.edu (boinc.tacc.utexas.edu)|129.114.60.78|:5060... failed: Connection timed out.

2019-04-01 19:05:01 (10720): Guest Log: Retrying.

2019-04-01 19:05:01 (10720): Guest Log: --2019-04-01 17:02:02--  (try: 2)  http://boinc.tacc.utexas.edu:5060/boincserver/v2/reef/carlos.red@utexas.edu/cpg.bed

2019-04-01 19:05:01 (10720): Guest Log: Connecting to boinc.tacc.utexas.edu (boinc.tacc.utexas.edu)|129.114.60.78|:5060... failed: Connection timed out.

2019-04-01 19:05:01 (10720): Guest Log: Retrying.

2019-04-01 19:05:01 (10720): Guest Log: --2019-04-01 17:04:11--  (try: 3)  http://boinc.tacc.utexas.edu:5060/boincserver/v2/reef/carlos.red@utexas.edu/cpg.bed

2019-04-01 19:05:01 (10720): Starting VM. (boinc_69b3b36b06072eb3, slot#0)
2019-04-01 19:05:09 (10720): Successfully started VM. (PID = '10896')
2019-04-01 19:05:09 (10720): Reporting VM Process ID to BOINC.
2019-04-01 19:05:14 (10720): VM state change detected. (old = 'poweroff', new = 'running')
2019-04-01 19:05:24 (10720): Status Report: Elapsed Time: '13637.122699'
2019-04-01 19:05:24 (10720): Status Report: CPU Time: '774.747767'
2019-04-01 19:05:24 (10720): Preference change detected
2019-04-01 19:05:24 (10720): Setting CPU throttle for VM. (100%)
2019-04-01 19:05:24 (10720): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2019-04-01 19:07:25 (10720): Powering off VM.
2019-04-01 19:07:25 (10720): Successfully stopped VM.
2019-04-01 19:07:30 (10720): Deregistering VM. (boinc_69b3b36b06072eb3, slot#0)
2019-04-01 19:07:30 (10720): Removing virtual disk drive(s) from VM.
2019-04-01 19:07:30 (10720): Removing network bandwidth throttle group from VM.
2019-04-01 19:07:30 (10720): Removing storage controller(s) from VM.
2019-04-01 19:07:30 (10720): Removing VM from VirtualBox.

    Hypervisor System Log:

65:01:04.442438          ERROR [COM]: aRC=VBOX_E_INVALID_OBJECT_STATE (0x80bb0007) aIID={b2547866-a0a1-4391-8b86-6952d82efaa0} aComponent={MachineWrap} aText={The given session is busy}, preserve=false aResultDetail=0
65:02:56.252637          ERROR [COM]: aRC=E_FAIL (0x80004005) aIID={b2547866-a0a1-4391-8b86-6952d82efaa0} aComponent={SessionMachine} aText={This machine does not have any snapshots}, preserve=false aResultDetail=0
65:02:56.359650          ERROR [COM]: aRC=VBOX_E_INVALID_OBJECT_STATE (0x80bb0007) aIID={4afe423b-43e0-e9d0-82e8-ceb307940dda} aComponent={MediumWrap} aText={Medium 'C:\Program Files\Oracle\VirtualBox/VBoxGuestAdditions.iso' is locked for reading by another task}, preserve=false aResultDetail=0
65:02:56.399655          ERROR [COM]: aRC=E_ACCESSDENIED (0x80070005) aIID={4afe423b-43e0-e9d0-82e8-ceb307940dda} aComponent={MediumWrap} aText={The object is not ready}, preserve=false aResultDetail=0
65:02:56.399655          ERROR [COM]: aRC=VBOX_E_INVALID_OBJECT_STATE (0x80bb0007) aIID={4afe423b-43e0-e9d0-82e8-ceb307940dda} aComponent={MediumWrap} aText={Medium 'C:\Program Files\Oracle\VirtualBox/VBoxGuestAdditions.iso' is locked for reading by another task}, preserve=false aResultDetail=0
65:03:17.397322          ERROR [COM]: aRC=VBOX_E_OBJECT_NOT_FOUND (0x80bb0001) aIID={0169423f-46b4-cde9-91af-1e9d5b6cd945} aComponent={VirtualBoxWrap} aText={Could not find a registered machine named 'boinc_cb1f6457cab78aa0'}, preserve=false aResultDetail=0
65:03:19.466584          ERROR [COM]: aRC=VBOX_E_INVALID_OBJECT_STATE (0x80bb0007) aIID={b2547866-a0a1-4391-8b86-6952d82efaa0} aComponent={MachineWrap} aText={The given session is busy}, preserve=false aResultDetail=0
65:07:44.956797          ERROR [COM]: aRC=VBOX_E_INVALID_OBJECT_STATE (0x80bb0007) aIID={b2547866-a0a1-4391-8b86-6952d82efaa0} aComponent={MachineWrap} aText={The given session is busy}, preserve=false aResultDetail=0
65:14:40.095513          ERROR [COM]: aRC=VBOX_E_INVALID_OBJECT_STATE (0x80bb0007) aIID={b2547866-a0a1-4391-8b86-6952d82efaa0} aComponent={MachineWrap} aText={The given session is busy}, preserve=false aResultDetail=0
65:21:12.072288          ERROR [COM]: aRC=E_FAIL (0x80004005) aIID={b2547866-a0a1-4391-8b86-6952d82efaa0} aComponent={SessionMachine} aText={This machine does not have any snapshots}, preserve=false aResultDetail=0
65:21:12.160299          ERROR [COM]: aRC=VBOX_E_INVALID_OBJECT_STATE (0x80bb0007) aIID={4afe423b-43e0-e9d0-82e8-ceb307940dda} aComponent={MediumWrap} aText={Medium 'C:\Program Files\Oracle\VirtualBox/VBoxGuestAdditions.iso' is locked for reading by another task}, preserve=false aResultDetail=0
65:21:12.187303          ERROR [COM]: aRC=E_ACCESSDENIED (0x80070005) aIID={4afe423b-43e0-e9d0-82e8-ceb307940dda} aComponent={MediumWrap} aText={The object is not ready}, preserve=false aResultDetail=0
65:21:12.187303          ERROR [COM]: aRC=VBOX_E_INVALID_OBJECT_STATE (0x80bb0007) aIID={4afe423b-43e0-e9d0-82e8-ceb307940dda} aComponent={MediumWrap} aText={Medium 'C:\Program Files\Oracle\VirtualBox/VBoxGuestAdditions.iso' is locked for reading by another task}, preserve=false aResultDetail=0
65:21:34.088634          ERROR [COM]: aRC=VBOX_E_OBJECT_NOT_FOUND (0x80bb0001) aIID={0169423f-46b4-cde9-91af-1e9d5b6cd945} aComponent={VirtualBoxWrap} aText={Could not find a registered machine named 'boinc_cda9d32e2593a591'}, preserve=false aResultDetail=0
65:21:36.521473          ERROR [COM]: aRC=VBOX_E_INVALID_OBJECT_STATE (0x80bb0007) aIID={b2547866-a0a1-4391-8b86-6952d82efaa0} aComponent={MachineWrap} aText={The given session is busy}, preserve=false aResultDetail=0
65:21:39.933906          ERROR [COM]: aRC=VBOX_E_INVALID_OBJECT_STATE (0x80bb0007) aIID={b2547866-a0a1-4391-8b86-6952d82efaa0} aComponent={MachineWrap} aText={The given session is busy}, preserve=false aResultDetail=0
65:24:53.174945          ERROR [COM]: aRC=E_FAIL (0x80004005) aIID={b2547866-a0a1-4391-8b86-6952d82efaa0} aComponent={SessionMachine} aText={This machine does not have any snapshots}, preserve=false aResultDetail=0
65:24:53.325964          ERROR [COM]: aRC=VBOX_E_INVALID_OBJECT_STATE (0x80bb0007) aIID={4afe423b-43e0-e9d0-82e8-ceb307940dda} aComponent={MediumWrap} aText={Medium 'C:\Program Files\Oracle\VirtualBox/VBoxGuestAdditions.iso' is locked for reading by another task}, preserve=false aResultDetail=0
65:24:53.346467          ERROR [COM]: aRC=E_ACCESSDENIED (0x80070005) aIID={4afe423b-43e0-e9d0-82e8-ceb307940dda} aComponent={MediumWrap} aText={The object is not ready}, preserve=false aResultDetail=0
65:24:53.346467          ERROR [COM]: aRC=VBOX_E_INVALID_OBJECT_STATE (0x80bb0007) aIID={4afe423b-43e0-e9d0-82e8-ceb307940dda} aComponent={MediumWrap} aText={Medium 'C:\Program Files\Oracle\VirtualBox/VBoxGuestAdditions.iso' is locked for reading by another task}, preserve=false aResultDetail=0
65:25:09.323495          ERROR [COM]: aRC=VBOX_E_OBJECT_NOT_FOUND (0x80bb0001) aIID={0169423f-46b4-cde9-91af-1e9d5b6cd945} aComponent={VirtualBoxWrap} aText={Could not find a registered machine named 'boinc_d2a72d610766def2'}, preserve=false aResultDetail=0
65:25:12.226364          ERROR [COM]: aRC=VBOX_E_INVALID_OBJECT_STATE (0x80bb0007) aIID={b2547866-a0a1-4391-8b86-6952d82efaa0} aComponent={MachineWrap} aText={The given session is busy}, preserve=false aResultDetail=0
65:26:43.608968          ERROR [COM]: aRC=E_FAIL (0x80004005) aIID={b2547866-a0a1-4391-8b86-6952d82efaa0} aComponent={SessionMachine} aText={This machine does not have any snapshots}, preserve=false aResultDetail=0
65:26:43.870001          ERROR [COM]: aRC=VBOX_E_INVALID_OBJECT_STATE (0x80bb0007) aIID={4afe423b-43e0-e9d0-82e8-ceb307940dda} aComponent={MediumWrap} aText={Medium 'C:\Program Files\Oracle\VirtualBox/VBoxGuestAdditions.iso' is locked for reading by another task}, preserve=false aResultDetail=0
65:26:43.894504          ERROR [COM]: aRC=E_ACCESSDENIED (0x80070005) aIID={4afe423b-43e0-e9d0-82e8-ceb307940dda} aComponent={MediumWrap} aText={The object is not ready}, preserve=false aResultDetail=0
65:26:43.894504          ERROR [COM]: aRC=VBOX_E_INVALID_OBJECT_STATE (0x80bb0007) aIID={4afe423b-43e0-e9d0-82e8-ceb307940dda} aComponent={MediumWrap} aText={Medium 'C:\Program Files\Oracle\VirtualBox/VBoxGuestAdditions.iso' is locked for reading by another task}, preserve=false aResultDetail=0
65:26:52.997160          ERROR [COM]: aRC=VBOX_E_OBJECT_NOT_FOUND (0x80bb0001) aIID={0169423f-46b4-cde9-91af-1e9d5b6cd945} aComponent={VirtualBoxWrap} aText={Could not find a registered machine named 'boinc_d3465023b51cc58b'}, preserve=false aResultDetail=0
65:26:55.591490          ERROR [COM]: aRC=VBOX_E_INVALID_OBJECT_STATE (0x80bb0007) aIID={b2547866-a0a1-4391-8b86-6952d82efaa0} aComponent={MachineWrap} aText={The given session is busy}, preserve=false aResultDetail=0
65:27:56.078671          ERROR [COM]: aRC=VBOX_E_INVALID_OBJECT_STATE (0x80bb0007) aIID={b2547866-a0a1-4391-8b86-6952d82efaa0} aComponent={MachineWrap} aText={The given session is busy}, preserve=false aResultDetail=0
65:30:22.279236          ERROR [COM]: aRC=E_FAIL (0x80004005) aIID={b2547866-a0a1-4391-8b86-6952d82efaa0} aComponent={SessionMachine} aText={This machine does not have any snapshots}, preserve=false aResultDetail=0
65:30:22.327242          ERROR [COM]: aRC=VBOX_E_INVALID_OBJECT_STATE (0x80bb0007) aIID={4afe423b-43e0-e9d0-82e8-ceb307940dda} aComponent={MediumWrap} aText={Medium 'C:\Program Files\Oracle\VirtualBox/VBoxGuestAdditions.iso' is locked for reading by another task}, preserve=false aResultDetail=0
65:30:22.347744          ERROR [COM]: aRC=E_ACCESSDENIED (0x80070005) aIID={4afe423b-43e0-e9d0-82e8-ceb307940dda} aComponent={MediumWrap} aText={The object is not ready}, preserve=false aResultDetail=0
65:30:22.348244          ERROR [COM]: aRC=VBOX_E_INVALID_OBJECT_STATE (0x80bb0007) aIID={4afe423b-43e0-e9d0-82e8-ceb307940dda} aComponent={MediumWrap} aText={Medium 'C:\Program Files\Oracle\VirtualBox/VBoxGuestAdditions.iso' is locked for reading by another task}, preserve=false aResultDetail=0

    VM Execution Log:


    VM Startup Log:


    VM Trace Log:

19:07:40 (10720): called boinc_finish(194)

</stderr_txt>
]]>